Journal
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
Volume 21, Issue 6, Pages 827-832Publisher
TAYLOR & FRANCIS INC
DOI: 10.1080/07391102.2004.10506972
Keywords
RNA secondary structure; similarity; virus; 3D graphical representation
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In this paper, we proposed a 3-D graphical representation of RNA secondary structures. Based on this representation, we outline an approach by constructing a 3-component vector whose components are the normalized leading eigenvalues of the L/L matrices associated with RNA secondary structure. The examination of similarities/dissimilarities among the secondary structure at the 3'-terminus of different viruses illustrates the utility of the approach.
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