Related references
Note: Only part of the references are listed.Soil is the origin for the presence of Naegleria fowleri in the thermal recreational waters
Mirna Moussa et al.
PARASITOLOGY RESEARCH (2015)
Microbial community structure and functioning in marine sediments associated with diffuse hydrothermal venting assessed by integrated meta-omics
Tim Urich et al.
ENVIRONMENTAL MICROBIOLOGY (2014)
A morphogenetic survey on ciliate plankton from a mountain lake pinpoints the necessity of lineage-specific barcode markers in microbial ecology
Thorsten Stoeck et al.
ENVIRONMENTAL MICROBIOLOGY (2014)
Genetic analysis among environmental strains of Balamuthia mandrillaris recovered from an artificial lagoon and from soil in Sonora, Mexico
Luis Fernando Lares-Jimenez et al.
EXPERIMENTAL PARASITOLOGY (2014)
Effects of long-term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach
Guillaume Lentendu et al.
MOLECULAR ECOLOGY (2014)
Acanthamoeba everywhere: high diversity of Acanthamoeba in soils
Stefan Geisen et al.
PARASITOLOGY RESEARCH (2014)
Soil water availability strongly alters the community composition of soil protists
Geisen Stefana et al.
PEDOBIOLOGIA (2014)
Discrepancy between Species Borders at Morphological and Molecular Levels in the Genus Cochliopodium (Amoebozoa, Himatismenida), with the Description of Cochliopodium plurinucleolum n. sp.
Stefan Geisen et al.
PROTIST (2014)
Amplification primers of SSU rDNA for soil protists
Sina M. Adl et al.
SOIL BIOLOGY & BIOCHEMISTRY (2014)
Assimilation of Cellulose-Derived Carbon by Microeukaryotes in Oxic and Anoxic Slurries of an Aerated Soil
Antonis Chatzinotas et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Phylogenetic interpretations and ecological potentials of the Mesomycetozoea (Ichthyosporea)
Sally L. Glockling et al.
FUNGAL ECOLOGY (2013)
Below-ground fine-scale distribution and soil versus fine root detection of fungal and soil oomycete communities in a French beech forest
Aurore Coince et al.
FUNGAL ECOLOGY (2013)
Global biogeography of highly diverse protistan communities in soil
Scott T. Bates et al.
ISME JOURNAL (2013)
Accuracy of protist diversity assessments: morphology compared with cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study
Charles Bachy et al.
ISME JOURNAL (2013)
Organic carbon transformations in high-Arctic peat soils: key functions and microorganisms
Alexander Tveit et al.
ISME JOURNAL (2013)
Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants
Thomas R. Turner et al.
ISME JOURNAL (2013)
Impacts of inundation and drought on eukaryote biodiversity in semi-arid floodplain soils
Darren S. Baldwin et al.
MOLECULAR ECOLOGY (2013)
Can Abundance of Protists Be Inferred from Sequence Data: A Case Study of Foraminifera
Alexandra A-T Weber et al.
PLOS ONE (2013)
Multigene Phylogenetic Reconstruction of the Tubulinea (Amoebozoa) Corroborates Four of the Six Major Lineages, while Additionally Revealing that Shell Composition Does not Predict Phylogeny in the Arcellinida
Daniel J. G. Lahr et al.
PROTIST (2013)
Extremely High Copy Numbers and Polymorphisms of the rDNA Operon Estimated from Single Cell Analysis of Oligotrich and Peritrich Ciliates
Jun Gong et al.
PROTIST (2013)
Metatranscriptomics of the marine sponge Geodia barretti: tackling phylogeny and function of its microbial community
Regina Radax et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Knowledge of morphology is still required when identifying new amoeba isolates by molecular techniques
Johan F. De Jonckheere et al.
EUROPEAN JOURNAL OF PROTISTOLOGY (2012)
Cryptic diversity within the choanoflagellate morphospecies complex Codosiga botrytis - Phylogeny and morphology of ancient and modern isolates
Daniel Stoupin et al.
EUROPEAN JOURNAL OF PROTISTOLOGY (2012)
The Revised Classification of Eukaryotes
Sina M. Adl et al.
JOURNAL OF EUKARYOTIC MICROBIOLOGY (2012)
jModelTest 2: more models, new heuristics and parallel computing
Diego Darriba et al.
NATURE METHODS (2012)
Identification and Detection of Phytophthora: Reviewing Our Progress, Identifying Our Needs
Frank N. Martin et al.
PLANT DISEASE (2012)
On a Cercopithifilaria sp transmitted by Rhipicephalus sanguineus: a neglected, but widespread filarioid of dogs
Domenico Otranto et al.
PARASITES & VECTORS (2012)
CREST - Classification Resources for Environmental Sequence Tags
Anders Lanzen et al.
PLOS ONE (2012)
CBOL Protist Working Group: Barcoding Eukaryotic Richness beyond the Animal, Plant, and Fungal Kingdoms
Jan Pawlowski et al.
PLOS BIOLOGY (2012)
Exploring and quantifying fungal diversity in freshwater lake ecosystems using rDNA cloning/sequencing and SSU tag pyrosequencing
Sebastien Monchy et al.
ENVIRONMENTAL MICROBIOLOGY (2011)
Exploring the composition and diversity of microbial communities at the Jan Mayen hydrothermal vent field using RNA and DNA
Anders Lanzen et al.
FEMS MICROBIOLOGY ECOLOGY (2011)
A Revised Classification of Naked Lobose Amoebae (Amoebozoa: Lobosa)
Alexey V. Smirnov et al.
PROTIST (2011)
Highly Diverse and Seasonally Dynamic Protist Community in a Pristine Peat Bog
Enrique Lara et al.
PROTIST (2011)
Molecular evidence for widespread occurrence of Foraminifera in soils
Franck Lejzerowicz et al.
ENVIRONMENTAL MICROBIOLOGY (2010)
Invalidation of Hyperamoeba by Transferring its Species to Other Genera of Myxogastria
Anna Maria Fiore-Donno et al.
JOURNAL OF EUKARYOTIC MICROBIOLOGY (2010)
SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building
Manolo Gouy et al.
MOLECULAR BIOLOGY AND EVOLUTION (2010)
Diversity in a hidden world: potential and limitation of next-generation sequencing for surveys of molecular diversity of eukaryotic microorganisms
Ralph Medinger et al.
MOLECULAR ECOLOGY (2010)
Belowground carbon allocation by trees drives seasonal patterns of extracellular enzyme activities by altering microbial community composition in a beech forest soil
Christina Kaiser et al.
NEW PHYTOLOGIST (2010)
The Life History of Flabellula baltica Smirnov (Gymnamoebae, Rhizopoda): Adaptations to a Spatially and Temporally Heterogeneous Environment
Tom Fenchel
PROTIST (2010)
Polymerase chain reaction primers miss half of rRNA microbial diversity
SunHee Hong et al.
ISME JOURNAL (2009)
A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
Linda A. Amaral-Zettler et al.
PLOS ONE (2009)
Phylogeny, Taxonomy, and Astounding Genetic Diversity of Glissomonadida ord. nov., The Dominant Gliding Zooflagellates in Soil (Protozoa: Cercozoa)
Alexis T. Howe et al.
PROTIST (2009)
Environmental rRNA inventories miss over half of protistan diversity
Sunok Jeon et al.
BMC MICROBIOLOGY (2008)
Elevated atmospheric CO2 affects soil microbial diversity associated with trembling aspen
Celine Lesaulnier et al.
ENVIRONMENTAL MICROBIOLOGY (2008)
Correct identification of species makes the amoebozoan rRNA tree congruent with morphology for the order Leptomyxida Page 1987;: with description of Acramoeba dendroida n. g., n. sp., originally misidentified as 'Gephyramoeba sp.'
Alexey V. Smirnov et al.
EUROPEAN JOURNAL OF PROTISTOLOGY (2008)
Genetic diversity of eukaryotic microorganisms in Lake Taihu, a large shallow subtropical lake in China
Meijun Chen et al.
MICROBIAL ECOLOGY (2008)
Simultaneous Assessment of Soil Microbial Community Structure and Function through Analysis of the Meta-Transcriptome
Tim Urich et al.
PLOS ONE (2008)
New insights into animal pathogenic oomycetes
Andrew J. Phillips et al.
TRENDS IN MICROBIOLOGY (2008)
Missing protists:: a molecular prospective
Slava Epstein et al.
BIODIVERSITY AND CONSERVATION (2008)
Protozoa from aboveground and ground soils of a tropical rain forest in Puerto Rico
Stuart S. Bamforth
PEDOBIOLOGIA (2007)
Molecular comparison of cultivable protozoa from a pristine and a polycyclic aromatic hydrocarbon polluted site
Enrique Lara et al.
SOIL BIOLOGY & BIOCHEMISTRY (2007)
Pathogenic and opportunistic free-living amoebae: Acanthamoeba spp., Balamuthia mandrillaris, Naegleria fowleri, and Sappinia diploidea
Govinda S. Visvesvara et al.
FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY (2007)
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Alexandros Stamatakis
BIOINFORMATICS (2006)
Eukaryotic diversity in historical soil samples
Seung Yeo Moon-van der Staay et al.
FEMS MICROBIOLOGY ECOLOGY (2006)
Molecular phylogeny and classification of the lobose amoebae
A Smirnov et al.
PROTIST (2005)
High diversity of the 'Spumella-like' flagellates:: an investigation based on the SSU rRNA gene sequences of isolates from habitats located in six different geographic regions
J Boenigk et al.
ENVIRONMENTAL MICROBIOLOGY (2005)
Parasitism and growth in the earthworm Lumbricus terrestris:: fitness costs of the gregarine parasite Monocystis sp.
SG Field et al.
PARASITOLOGY (2005)
Molecular phylogeny of Amoebozoa and the evolutionary significance of the unikont Phalansterium
T Cavalier-Smith et al.
EUROPEAN JOURNAL OF PROTISTOLOGY (2004)
Free-living amoebae as opportunistic and non-opportunistic pathogens of humans and animals
FL Schuster et al.
INTERNATIONAL JOURNAL FOR PARASITOLOGY (2004)
Protozoa and plant growth: the microbial loop in soil revisited
M Bonkowski
NEW PHYTOLOGIST (2004)
Phylum-specific environmental DNA analysis reveals remarkably high global biodiversity of Cercozoa (Protozoa)
D Bass et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2004)
How many novel eukaryotic 'kingdoms'? Pitfalls and limitations of environmental DNA surveys
Cedric Berney et al.
BMC BIOLOGY (2004)
Rapid evolutionary dynamics and disease threats to biodiversity
S Altizer et al.
TRENDS IN ECOLOGY & EVOLUTION (2003)
Oomycetes and fungi: similar weaponry to attack plants
M Latijnhouwers et al.
TRENDS IN MICROBIOLOGY (2003)
C and N mineralisation in the decomposer food webs of a European forest transect
D Schröter et al.
OIKOS (2003)
Density and diversity of protozoa in some arid Australian soils
BS Robinson et al.
JOURNAL OF EUKARYOTIC MICROBIOLOGY (2002)
Quantitative estimation of flagellate community structure and diversity in soil samples
F Ekelund et al.
PROTIST (2001)
DNA sequence quality trimming and vector removal
HH Chou et al.
BIOINFORMATICS (2001)
Morphological and molecular characterization of a new terrestrial allogromiid species:: Edaphoallogromia australica gen. et spec. nov (Foraminifera) from northern Queensland (Australia)
R Meisterfeld et al.
PROTIST (2001)
MRBAYES: Bayesian inference of phylogenetic trees
JP Huelsenbeck et al.
BIOINFORMATICS (2001)
Seasonal variability in abundance and diversity of soil gymnamoebae along a short transect in southeastern USA
P Bass et al.
JOURNAL OF EUKARYOTIC MICROBIOLOGY (2001)
Estimating the growth potential of the soil protozoan community
BJ Finlay et al.
PROTIST (2000)