4.3 Article

Peditree: Pedigree database analysis and visualization for breeding and science

Journal

JOURNAL OF HEREDITY
Volume 96, Issue 4, Pages 465-468

Publisher

OXFORD UNIV PRESS INC
DOI: 10.1093/jhered/esi059

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At the Wageningen Laboratory of Plant Breeding, a software package has been developed to query a simple structured database with variety pedigree data. The package, called Peditree, creates a tree-shaped representation of pedigree information and has several visualization and lookup options. Estimates of inbreeding coefficient within a pedigree or coefficients of coancestry among pedigrees can be obtained. Furthermore trait data-if available-can be linked, displayed within the pedigree tree, and used to highlight pedigree entries that comply with set criteria.

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