Related references
Note: Only part of the references are listed.Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
Donovan H. Parks et al.
NATURE MICROBIOLOGY (2017)
Scaling laws predict global microbial diversity
Kenneth J. Locey et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Status of the Archaeal and Bacterial Census: an Update
Patrick D. Schloss et al.
MBIO (2016)
Genomic Insights into a New Citrobacter koseri Strain Revealed Gene Exchanges with the Virulence-Associated Yersinia pestis pPCP1 Plasmid
Fabrice Armougom et al.
FRONTIERS IN MICROBIOLOGY (2016)
Unusual biology across a group comprising more than 15% of domain Bacteria
Christopher T. Brown et al.
NATURE (2015)
Microbial species delineation using whole genome sequences
Neha J. Varghese et al.
NUCLEIC ACIDS RESEARCH (2015)
Microbiomes in light of traits: A phylogenetic perspective
Jennifer B. H. Martiny et al.
SCIENCE (2015)
Complete Genome Sequence of Borrelia afzelii K78 and Comparative Genome Analysis
Wolfgang Schueler et al.
PLOS ONE (2015)
Then and now: a systematic review of the systematics of prokaryotes in the last 80 years
Aharon Oren et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2014)
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
Mincheol Kim et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences
Pablo Yarza et al.
NATURE REVIEWS MICROBIOLOGY (2014)
Trait-based approaches for understanding microbial biodiversity and ecosystem functioning
Sascha Krause et al.
FRONTIERS IN MICROBIOLOGY (2014)
Insights into the phylogeny and coding potential of microbial dark matter
Christian Rinke et al.
NATURE (2013)
Oligotyping: differentiating between closely related microbial taxa using 16S rRNA gene data
A. Murat Eren et al.
METHODS IN ECOLOGY AND EVOLUTION (2013)
Bacterial species may exist, metagenomics reveal
Alejandro Caro-Quintero et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Diversity of 16S rRNA Genes within Individual Prokaryotic Genomes
Anna Y. Pei et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
V-Xtractor: An open-source, high-throughput software tool to identify and extract hypervariable regions of small subunit (16 S/18 S) ribosomal RNA gene sequences
Martin Hartmann et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Analysis of Ten Brucella Genomes Reveals Evidence for Horizontal Gene Transfer Despite a Preferred Intracellular Lifestyle
Alice R. Wattam et al.
JOURNAL OF BACTERIOLOGY (2009)
The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes
F. Meyer et al.
BMC BIOINFORMATICS (2008)
Recombination and the nature of bacterial speciation
Christophe Fraser et al.
SCIENCE (2007)
DNA-DNA hybridization values and their relationship to whole-genome sequence similarities
Johan Goris et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Genotypic diversity within a natural coastal bacterioplankton population
JR Thompson et al.
SCIENCE (2005)
NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins
KD Pruitt et al.
NUCLEIC ACIDS RESEARCH (2005)
Estimating prokaryotic diversity and its limits
TP Curtis et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)