4.6 Article

A Hidden Pitfall in the Preparation of Agar Media Undermines Microorganism Cultivability

Related references

Note: Only part of the references are listed.
Article Multidisciplinary Sciences

Insights into the phylogeny and coding potential of microbial dark matter

Christian Rinke et al.

NATURE (2013)

Article Biotechnology & Applied Microbiology

DECIPHER, a Search-Based Approach to Chimera Identification for 16S rRNA Sequences

Erik S. Wright et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)

Review Microbiology

Growing Unculturable Bacteria

Eric J. Stewart

JOURNAL OF BACTERIOLOGY (2012)

Review Biotechnology & Applied Microbiology

Are Uncultivated Bacteria Really Uncultivable?

Indun Dewi Puspita et al.

MICROBES AND ENVIRONMENTS (2012)

Article Biochemistry & Molecular Biology

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

Brian J. Haas et al.

GENOME RESEARCH (2011)

Article Biochemical Research Methods

PyNAST: a flexible tool for aligning sequences to a template alignment

J. Gregory Caporaso et al.

BIOINFORMATICS (2010)

Article Biochemical Research Methods

Search and clustering orders of magnitude faster than BLAST

Robert C. Edgar

BIOINFORMATICS (2010)

Article Biochemistry & Molecular Biology

Improving the culturability of freshwater bacteria using FW70, a low-nutrient solid medium amended with sodium pyruvate

Iori Imazaki et al.

CANADIAN JOURNAL OF MICROBIOLOGY (2010)

Article Biotechnology & Applied Microbiology

Generation of reactive oxygen species from conventional laboratory media

Takuji Nakashima et al.

JOURNAL OF BIOSCIENCE AND BIOENGINEERING (2010)

Letter Biochemical Research Methods

Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions

Jens Reeder et al.

NATURE METHODS (2010)

Letter Biochemical Research Methods

QIIME allows analysis of high-throughput community sequencing data

J. Gregory Caporaso et al.

NATURE METHODS (2010)

Article Biotechnology & Applied Microbiology

Short peptide induces an uncultivable microorganism to grow in vitro

D. Nichols et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)

Article Multidisciplinary Sciences

SAR11 marine bacteria require exogenous reduced sulphur for growth

H. James Tripp et al.

NATURE (2008)

Article Biochemical Research Methods

Cultivating previously uncultured soil bacteria using a soil substrate membrane system

Belinda C. Ferrari et al.

NATURE PROTOCOLS (2008)

Article Biotechnology & Applied Microbiology

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

Qiong Wang et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)

Article Ecology

Pyrosequencing enumerates and contrasts soil microbial diversity

Luiz Fw Roesch et al.

ISME JOURNAL (2007)

Article Biotechnology & Applied Microbiology

Recovery of Flavobacterium psychrophilum viable cells using a charcoal-based solid medium

B. Alvarez et al.

LETTERS IN APPLIED MICROBIOLOGY (2007)

Article Multidisciplinary Sciences

Archaea predominate among ammonia-oxidizing prokaryotes in soils

S. Leininger et al.

NATURE (2006)

Article Biotechnology & Applied Microbiology

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

T. Z. DeSantis et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)

Article Biotechnology & Applied Microbiology

UniFrac: a new phylogenetic method for comparing microbial communities

C Lozupone et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)

Article Multidisciplinary Sciences

Genome sequencing in microfabricated high-density picolitre reactors

M Margulies et al.

NATURE (2005)

Article Multidisciplinary Sciences

Cultivating the uncultured

K Zengler et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)

Article Biotechnology & Applied Microbiology

High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates

SA Connon et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2002)