4.6 Article

Biochemical Diversity of Carboxyl Esterases and Lipases from Lake Arreo (Spain): a Metagenomic Approach

Journal

APPLIED AND ENVIRONMENTAL MICROBIOLOGY
Volume 79, Issue 12, Pages 3553-3562

Publisher

AMER SOC MICROBIOLOGY
DOI: 10.1128/AEM.00240-13

Keywords

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Funding

  1. Spanish Ministry of Economy and Competitiveness [CSD2007-00005]
  2. European Community project MAGICPAH [FP7-KBBE-2009-245226]
  3. European Regional Development Fund (ERDF)
  4. Government of Canada through Genome Canada
  5. Ontario Genomics Institute
  6. Ontario Research Fund [2009-OGI-ABC-1405, ORF-GL2-01-004]
  7. CSIC for a JAE fellowship

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The esterases and lipases from the alpha/beta hydrolase superfamily exhibit an enormous sequence diversity, fold plasticity, and activities. Here, we present the comprehensive sequence and biochemical analyses of seven distinct esterases and lipases from the metagenome of Lake Arreo, an evaporite karstic lake in Spain (42 degrees 46' N, 2 degrees 59' W; altitude, 655 m). Together with oligonucleotide usage patterns and BLASTP analysis, our study of esterases/lipases mined from Lake Arreo suggests that its sediment contains moderately halophilic and cold-adapted proteobacteria containing DNA fragments of distantly related plasmids or chromosomal genomic islands of plasmid and phage origins. This metagenome encodes esterases/lipases with broad substrate profiles (tested over a set of 101 structurally diverse esters) and habitat-specific characteristics, as they exhibit maximal activity at alkaline pH (8.0 to 8.5) and temperature of 16 to 40 degrees C, and they are stimulated (1.5 to 2.2 times) by chloride ions (0.1 to 1.2 M), reflecting an adaptation to environmental conditions. Our work provides further insights into the potential significance of the Lake Arreo esterases/lipases for biotechnology processes (i.e., production of enantiomers and sugar esters), because these enzymes are salt tolerant and are active at low temperatures and against a broad range of substrates. As an example, the ability of a single protein to hydrolyze triacylglycerols, (non) halogenated alkyl and aryl esters, cinnamoyl and carbohydrate esters, lactones, and chiral epoxides to a similar extent was demonstrated.

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