Journal
APPLIED AND ENVIRONMENTAL MICROBIOLOGY
Volume 79, Issue 12, Pages 3637-3648Publisher
AMER SOC MICROBIOLOGY
DOI: 10.1128/AEM.00153-13
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Funding
- Canadian Astrobiology Training Program (CATP)
- National Sciences and Engineering Research Council of Canada (NSERC)
- Canadian Space Agency (CSA)
- Fonds de Recherche du Quebec-Nature et Technologies (FQRNT)
- Canada Foundation of Innovation (CFI)
- Polar Continent Shelf Program (PCSP)
- Northern Scientific Training Program (NSTP)
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The Lost Hammer (LH) Spring is the coldest and saltiest terrestrial spring discovered to date and is characterized by perennial discharges at subzero temperatures (-5 degrees C), hypersalinity (salinity, 24%), and reducing (approximate to-165 mV), microoxic, and oligotrophic conditions. It is rich in sulfates (10.0%, wt/wt), dissolved H2S/sulfides (up to 25 ppm), ammonia (approximate to 381 mu M), and methane (11.1 g day(-1)). To determine its total functional and genetic potential and to identify its active microbial components, we performed metagenomic analyses of the LH Spring outlet microbial community and pyrosequencing analyses of the cDNA of its 16S rRNA genes. Reads related to Cyanobacteria (19.7%), Bacteroidetes (13.3%), and Proteobacteria (6.6%) represented the dominant phyla identified among the classified sequences. Reconstruction of the enzyme pathways responsible for bacterial nitrification/denitrification/ammonification and sulfate reduction appeared nearly complete in the metagenomic data set. In the cDNA profile of the LH Spring active community, ammonia oxidizers (Thaumarchaeota), denitrifiers (Pseudomonas spp.), sulfate reducers (Desulfobulbus spp.), and other sulfur oxidizers (Thermoprotei) were present, highlighting their involvement in nitrogen and sulfur cycling. Stress response genes for adapting to cold, osmotic stress, and oxidative stress were also abundant in the metagenome. Comparison of the composition of the functional community of the LH Spring to metagenomes from other saline/subzero environments revealed a close association between the LH Spring and another Canadian high-Arctic permafrost environment, particularly in genes related to sulfur metabolism and dormancy. Overall, this study provides insights into the metabolic potential and the active microbial populations that exist in this hypersaline cryoenvironment and contributes to our understanding of microbial ecology in extreme environments.
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