4.6 Article

Dynamic Viral Populations in Hypersaline Systems as Revealed by Metagenomic Assembly

Related references

Note: Only part of the references are listed.
Review Biotechnology & Applied Microbiology

Culture-Independent Approaches for Studying Viruses from Hypersaline Environments

Fernando Santos et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)

Article Multidisciplinary Sciences

Reconstructing Viral Genomes from the Environment Using Fosmid Clones: The Case of Haloviruses

Inmaculada Garcia-Heredia et al.

PLOS ONE (2012)

Article Multidisciplinary Sciences

Hypervariable loci in the human gut virome

Samuel Minot et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Ecology

Metatranscriptomic analysis of extremely halophilic viral communities

Fernando Santos et al.

ISME JOURNAL (2011)

Article Multidisciplinary Sciences

Haloquadratum walsbyi: Limited Diversity in a Global Pond

Mike L. Dyall-Smith et al.

PLOS ONE (2011)

Article Multidisciplinary Sciences

Strain-resolved community genomic analysis of gut microbial colonization in a premature infant

Michael J. Morowitz et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Multidisciplinary Sciences

Repeating patterns of virioplankton production within an estuarine ecosystem

Danielle M. Winget et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Multidisciplinary Sciences

Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism

Luke R. Thompson et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Virology

Exploring the viral world through metagenomics

Karyna Rosario et al.

CURRENT OPINION IN VIROLOGY (2011)

Review Microbiology

The archeoviruses

Mery Pina et al.

FEMS MICROBIOLOGY REVIEWS (2011)

Article Biotechnology & Applied Microbiology

Halophiles 2010: Life in Saline Environments

Y. Ma et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)

Article Biochemical Research Methods

Tablet-next generation sequence assembly visualization

Iain Milne et al.

BIOINFORMATICS (2010)

Article Biochemical Research Methods

Prodigal: prokaryotic gene recognition and translation initiation site identification

Doug Hyatt et al.

BMC BIOINFORMATICS (2010)

Article Microbiology

The metavirome of a hypersaline environment

Fernando Santos et al.

ENVIRONMENTAL MICROBIOLOGY (2010)

Article Ecology

Viral and microbial community dynamics in four aquatic environments

Beltran Rodriguez-Brito et al.

ISME JOURNAL (2010)

Article Biochemistry & Molecular Biology

ACLAME: A CLAssification of Mobile genetic Elements, update 2010

Raphael Leplae et al.

NUCLEIC ACIDS RESEARCH (2010)

Review Biochemistry & Molecular Biology

New dimensions of the virus world discovered through metagenomics

David M. Kristensen et al.

TRENDS IN MICROBIOLOGY (2010)

Review Microbiology

Current insights into phage biodiversity and biogeography

Rebecca Vega Thurber

CURRENT OPINION IN MICROBIOLOGY (2009)

Article Biochemistry & Molecular Biology

ABySS: A parallel assembler for short read sequence data

Jared T. Simpson et al.

GENOME RESEARCH (2009)

Article Biochemistry & Molecular Biology

An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope

Maija K. Pietila et al.

MOLECULAR MICROBIOLOGY (2009)

Review Microbiology

OPINION Explaining microbial population genomics through phage predation

Francisco Rodriguez-Valera et al.

NATURE REVIEWS MICROBIOLOGY (2009)

Article Biotechnology & Applied Microbiology

Assembly of viral metagenomes from Yellowstone hot springs

Thomas Schoenfeld et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)

Article Biotechnology & Applied Microbiology

Metagenomics: Read length matters

K. Eric Wommack et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)

Article Biotechnology & Applied Microbiology

Amplification of uncultured single-stranded DNA viruses from rice paddy soil

Kyoung-Ho Kim et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)

Review Microbiology

Bacteriophage genomics

Graham F. Hatfull

CURRENT OPINION IN MICROBIOLOGY (2008)

Article Microbiology

Prokaryotic diversity in Tuz Lake, a hypersaline environment in Inland Turkey

Mehmet Burcin Mutlu et al.

FEMS MICROBIOLOGY ECOLOGY (2008)

Article Biochemistry & Molecular Biology

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

Daniel R. Zerbino et al.

GENOME RESEARCH (2008)

Article Multidisciplinary Sciences

Functional metagenomic profiling of nine biomes

Elizabeth A. Dinsdale et al.

NATURE (2008)

Article Multidisciplinary Sciences

Virus population dynamics and acquired virus resistance in natural microbial communities

Anders F. Andersson et al.

SCIENCE (2008)

Article Biochemistry & Molecular Biology

SILVA:: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

Elmar Pruesse et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Multidisciplinary Sciences

Virus movement maintains local virus population diversity

Jamie C. Snyder et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biotechnology & Applied Microbiology

Sequence analysis of an Archaeal virus isolated from a hypersaline lake in Inner Mongolia, China

Eulyn Pagaling et al.

BMC GENOMICS (2007)

Review Microbiology

Marine viruses - major players in the global ecosystem

Curtis A. Suttle

NATURE REVIEWS MICROBIOLOGY (2007)

Review Microbiology

Virus-host interactions in salt lakes

Kate Porter et al.

CURRENT OPINION IN MICROBIOLOGY (2007)

Article Microbiology

Metagenomic approach to the study of halophages:: the environmental halophage 1

Fernando Santos et al.

ENVIRONMENTAL MICROBIOLOGY (2007)

Article Multidisciplinary Sciences

Genome dynamics in a natural archaeal population

Eric E. Allen et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Multidisciplinary Sciences

Lineages of acidophilic archaea revealed by community genomic analysis

Brett J. Baker et al.

SCIENCE (2006)

Article Biochemistry & Molecular Biology

The marine viromes of four oceanic regions

Florent E. Angly et al.

PLOS BIOLOGY (2006)

Article Biotechnology & Applied Microbiology

Seasonal variations in virus-host populations in Norwegian coastal waters:: Focusing on the cyanophage community infecting marine Synechococcus spp.

Ruth-Anne Sandaa et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)

Article Biotechnology & Applied Microbiology

Microbial diversity in Maras salterns, a hypersaline environment in the Peruvian Andes

Lenin Maturrano et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)

Article Multidisciplinary Sciences

The genome of Salinibacter ruber:: Convergence and gene exchange among hyperhalophilic bacteria and archaea

EF Mongodin et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Multidisciplinary Sciences

Photosynthesis genes in marine viruses yield proteins during host infection

D Lindell et al.

NATURE (2005)

Article Multidisciplinary Sciences

Genome sequencing in microfabricated high-density picolitre reactors

M Margulies et al.

NATURE (2005)

Article Biochemistry & Molecular Biology

InterProScan: protein domains identifier

E Quevillon et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemistry & Molecular Biology

Genome sequence of Haloarcula marismortui:: A halophilic archaeon from the Dead Sea

NS Baliga et al.

GENOME RESEARCH (2004)

Article Microbiology

Haloviruses HF1 and HF2: Evidence for a recent and large recombination event

SL Tang et al.

JOURNAL OF BACTERIOLOGY (2004)

Article Biochemistry & Molecular Biology

Virioplankton community structure along a salinity gradient in a solar saltern

RA Sandaa et al.

EXTREMOPHILES (2003)

Article Ecology

Temporal dynamics of natural communities of marine algal viruses and eukaryotes

SM Short et al.

AQUATIC MICROBIAL ECOLOGY (2003)

Article Microbiology

Haloarchaeal viruses: how diverse are they?

M Dyall-Smith et al.

RESEARCH IN MICROBIOLOGY (2003)

Article Biochemistry & Molecular Biology

Demonstration of a sensory rhodopsin in eubacteria

KH Jung et al.

MOLECULAR MICROBIOLOGY (2003)

Article Biochemistry & Molecular Biology

HF2: a double-stranded DNA tailed haloarchaeal virus with a mosaic genome

SL Tang et al.

MOLECULAR MICROBIOLOGY (2002)

Article Marine & Freshwater Biology

Anthropogenic salinisation of inland waters

WD Williams

HYDROBIOLOGIA (2001)