4.3 Article

Gordonibacter faecihominis sp nov., isolated from human faeces

Publisher

SPRINGER
DOI: 10.1007/s10482-014-0212-6

Keywords

Gordonibacter faecihominis sp nov.; Actinobacteria; Taxonomy

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Funding

  1. Global R&D Center (GRDC) through the National Research Foundation of Korea (NRF) - Ministry of Science, ICT and Future Planning (MSIFP) of the Republic of Korea
  2. Bio and Medical Technology Development Program of the NRF by the MSIFP of the Republic of Korea
  3. KRIBB Research Initiative Program
  4. Chonbuk National University

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A novel actinobacterial strain, designated CAT-2(T), was isolated from human faeces as a bacterium capable of dehydroxylating (+)-catechin derivatives. Strain CAT-2(T) was found to be strictly anaerobic, Gram-positive, non-motile and non-spore-forming coccobacilli. The major fatty acids were identified as C-16:0 DMA (dimethy acetal), C-16:0, C-14:0, anteiso-C-15:0 and iso-C-14:0. The three predominant menaquinones were identified as MK-6 (menaquinene-6), MMK-6 (monomethylmenaquinone-6) and DMMK-6 (dimethylmenaquinone-6). The polar lipids were found to be diphosphatidylglycerol, phosphatidylglycerol and four unidentified glycolipid. The DNA G+C content of strain CAT-2(T) was 68.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequence similarities showed that strain CAT-2(T) belongs to the genus Gordonibacter, sharing the highest level of sequence homology with Gordonibacter pamelaeae DSM 19378(T) (97.3 %). Combined phenotypic, chemotaxonomic and phylogenetic characteristics support the conclusion that the strain CAT-2(T) represents a novel species, for which the name Gordonibacter faecihominis sp. nov. is proposed. The type strain is CAT-2(T) (= KCTC 15204(T) = JCM 16058(T)).

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