4.3 Article

Thalassococcus lentus sp nov., an alphaproteobacterium isolated from seawater of a seaweed farm

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SPRINGER
DOI: 10.1007/s10482-012-9826-8

Keywords

Thalassococcus lentus; Novel species; Polyphasic taxonomy; Seawater

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Funding

  1. Program for Collection of Domestic Biological Resources from the National Institute of Biological Resources (NIBR)
  2. BK 21 program from the Ministry of Education, Science and Technology (MEST) of the Republic of Korea

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A Gram-negative, non-motile and rod- or ovoid-shaped bacterial strain, designated YCS-24(T), was isolated from seawater of a seaweed farm in the South Sea, South Korea. Strain YCS-24(T) grew optimally at 25-28 A degrees C, at pH 7.0-7.5 and in the presence of 2 % (w/v) NaCl. Strain YCS-24(T) exhibited the highest 16S rRNA gene sequence similarity values of 97.5 and 97.1 % to the type strains of Thalassobius maritimus and Thalassococcus halodurans, respectively. The neighbour-joining, maximum-likelihood and maximum-parsimony phylogenetic trees based on 16S rRNA gene sequences revealed that strain YCS-24(T) clustered with the type strain of T. halodurans. The DNA G+C content of strain YCS-24(T) was 58.0 mol% and its DNA-DNA relatedness values with T. halodurans JCM 13833(T) and T. maritimus GSW-M6(T) were 17 +/- A 6.2 and 23 +/- A 9.2 %, respectively. The predominant ubiquinone found in strain YCS-24(T) was Q-10 and the predominant fatty acid of strain YCS-24(T) was C-18:1 omega 7c. The major polar lipids of strain YCS-24(T) were phosphatidylcholine, phosphatidylglycerol, one unidentified aminolipid and one unidentified lipid. Differential phenotypic properties, together with the phylogenetic and genetic distinctiveness, demonstrated that strain YCS-24(T) is distinguished from T. halodurans. On the basis of the data presented, strain YCS-24(T) (= KCTC 32084(T) = CCUG 62791(T)) represents a novel species of the genus Thalassococcus, for which the name Thalassococcus lentus sp. nov. is proposed.

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