4.7 Article

Galaxy: A platform for interactive large-scale genome analysis

Journal

GENOME RESEARCH
Volume 15, Issue 10, Pages 1451-1455

Publisher

COLD SPRING HARBOR LAB PRESS, PUBLICATIONS DEPT
DOI: 10.1101/gr.4086505

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Funding

  1. NHGRI NIH HHS [HG02238, R01 HG002238] Funding Source: Medline
  2. NIDDK NIH HHS [R56 DK065806, R01 DK065806, DK65806] Funding Source: Medline

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Accessing and analyzing the exponentially expanding genomic sequence and functional data pose a challenge for biomedical researchers. Here we describe ail interactive system, Galaxy, that combines the power of existing genome annotation databases with a simple Web portal to enable users to search remote resources, combine data from independent queries, and Visualize the results. The heart of Galaxy is a flexible history system that stores the queries from each user; performs operations Such as intersections, unions, and Subtractions; and links to other computational tools. Galaxy call be accessed at http://g2.bx.psu.edu.

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