4.5 Review Book Chapter

Rewiring Cells: Synthetic Biology as a Tool to Interrogate the Organizational Principles of Living Systems

Journal

ANNUAL REVIEW OF BIOPHYSICS, VOL 39
Volume 39, Issue -, Pages 515-537

Publisher

ANNUAL REVIEWS
DOI: 10.1146/annurev.biophys.050708.133652

Keywords

modularity; network; engineering; evolvability

Categories

Funding

  1. NATIONAL EYE INSTITUTE [PN2EY016546] Funding Source: NIH RePORTER
  2. NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES [R01GM062583, R01GM055040] Funding Source: NIH RePORTER
  3. Howard Hughes Medical Institute Funding Source: Medline
  4. NEI NIH HHS [PN2 EY016546, PN2 EY016546-08] Funding Source: Medline
  5. NIGMS NIH HHS [R01 GM062583-08, R01 GM055040-12, R01 GM062583, R01 GM055040] Funding Source: Medline

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The living cell is an incredibly complex entity, and the goal of predictively and quantitatively understanding its function is one of the next great challenges in biology. Much of what we know about the cell concerns its constituent parts, but to a great extent we have yet to decode how these parts are organized to yield complex physiological function. Classically, we have learned about the organization of cellular networks by disrupting them through genetic or chemical means. The emerging discipline of synthetic biology offers an additional, powerful approach to study systems. By rearranging the parts that comprise existing networks, we can gain valuable insight into the hierarchical logic of the networks and identify the modular building blocks that evolution uses to generate innovative function. In addition, by building minimal toy networks, one can systematically explore the relationship between network structure and function. Here, we outline recent work that uses synthetic biology approaches to investigate the organization and function of cellular networks, and describe a vision for a synthetic biology toolkit that could be used to interrogate the design principles of diverse systems.

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