Journal
BIOCHEMISTRY
Volume 44, Issue 49, Pages 16341-16350Publisher
AMER CHEMICAL SOC
DOI: 10.1021/bi051618u
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- NCI NIH HHS [CA85306, CA19466] Funding Source: Medline
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The promoter of the hypoxia inducible factor 1 alpha (HIF-1 alpha) gene has a polvpurine/polypyrimidine tract (-65 to -85) overlapping or adjacent to several putative transcription facto;binding sites, and we found that mutagenesis of this region diminished basal HIF-1 alpha expression. Oligonucleotides representing this region of the HIF-1 alpha promoter were analyzed by electrophoretic mobility shift, chemical probing, circular dichroism, and DNA polymerase arrest assays. The guanine-rich strand was found to form a parallel, unimolecular quadruplex in the presence of potassium that was further stabilized by two known quadruplex binding compounds, the cationic porphyrin TmPyP4 and the natural product telomestatin, while TmPyP2, a positional isomer of TmPyP4, did not stabilize quadruplex formation. These data suggest that a quadruplex structure may form in a region of the HIF-1 alpha promoter that regulates basal HIF-1 alpha expression.
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