4.4 Article

A PRINCIPAL COMPONENT ANALYSIS FOR TREES

Journal

ANNALS OF APPLIED STATISTICS
Volume 3, Issue 4, Pages 1597-1615

Publisher

INST MATHEMATICAL STATISTICS
DOI: 10.1214/09-AOAS263

Keywords

Object oriented data analysis; population structure; principal component analysis; tree-lines; tree-structured objects

Funding

  1. NSF [DMS-06-06577, DMS-07-06761]
  2. NIH [RFA-ES-04-008, R01EB000219-NIH-NIBIB, R01CA124608-NIH-NCI]
  3. Direct For Mathematical & Physical Scien
  4. Division Of Mathematical Sciences [0854908, 854903] Funding Source: National Science Foundation

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The active field of Functional Data Analysis (about understanding the variation in a set of curves) has been recently extended to Object Oriented Data Analysis, which considers populations of more general objects. A particularly challenging extension of this set of ideas is to populations of tree-structured objects. We develop an analog of Principal Component Analysis for trees, based on the notion of tree-lines, and propose numerically fast (linear time) algorithms to solve the resulting problems to proven optimality. The solutions we obtain are used in the analysis of a data set of 73 individuals, where each data object is a tree of blood vessels in one person's brain. Our analysis revealed a significant relation between the age of the individuals and their brain vessel structure.

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