4.4 Article

Association of human leukocyte antigen ancestral haplotype 8.1 with adverse outcome of non-Hodgkin's lymphoma

Journal

GENES CHROMOSOMES & CANCER
Volume 46, Issue 5, Pages 500-507

Publisher

WILEY-LISS
DOI: 10.1002/gcc.20436

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Previous reports have implicated the tumor necrosis factor (TNF-308) locus to non-Hodgkin's lymphoma (NHL) outcome. The purpose of the study was to examine other chromosome components of the HILA 8.1 ancestral haplotype (AH) and their relation to the clinical course of INHL. HLA class I, II, TNF-308, and lymphotoxin alpha (LTA(+252)) alleles were analyzed in 154 newly diagnosed NHL patients. Three locus haplotypes were inferred from the unphased genotypes by a Bayesian implementation of the expectation maximization (EM) algorithm using the PHASE 2.1 program. TNF-308A was the only allele associated with fever, poor performance status, elevated beta 2-microglobulin, TNIF and its p75 receptor plasma levels. Although TNF-308A was in strong linkage disequilibrium with the remaining alleles of 8.1 AH, only HLA-A*01 and HLA-B*08 showed association with prognostic variables. A part of 8.1 AH (A*01-B*08-TNF-308A) was predictive for shorter freedom from progression and overall survival (RR = 2.47, P = 0.04 1; RR = 3.15; P = 0.0049), an association that was stronger than TIN F-308A alone and independent from International Prognostic Index (IRR = 1.55, P < 0.001; RR = 2.36; P < 0.0001). A*01-B*08-TNF-308A fragment of 8.IAH remained an independent predictive factor in a multivariate model. We conclude that 8.1 AH is an important contributor to NHL outcome. In contrast to A*01-8*08-TNF-308A, the remaining alleles (Cw*07, DRBI*03, LTA(+252G)) associated with the 8.1 AH seem to be its passive components. (c) 2007 Wiley-Liss, Inc.

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