Journal
BIOINFORMATICS
Volume 23, Issue 14, Pages 1862-1865Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btm235
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Funding
- NLM NIH HHS [R01 LM009254, R01 LM009254-02] Funding Source: Medline
- PHS HHS [R01-NLM-009254] Funding Source: Medline
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ummary: Discussion of point mutations is ubiquitous in biomedical literature, and manually compiling databases or literature on mutations in specific genes or proteins is tedious. We present an open-source, rule-based system, MutationFincler, for extracting point mutation mentions from text. On blind test data, it achieves nearly perfect precision and a markedly improved recall over a baseline.
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