Journal
BIOINFORMATICS
Volume 23, Issue 15, Pages 2021-2023Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btm281
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Funding
- NCRR NIH HHS [RR018522] Funding Source: Medline
- NIAID NIH HHS [Y1-AI-4894-01] Funding Source: Medline
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The accurate mass and time (AMT) tag approach is used for analysis of large scale experiments by combining information generated over multiple datasets and instrument types. The VIPER software package is one of the key components of the data processing pipeline and implements automated algorithms to discover LC-MS features, align and match these LC-MS features to a database of peptides previously identified in LC-MS/MS analyses, and identify and quantify pairs of isotopically labeled peptides.
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