4.6 Article

To how many simultaneous hypothesis tests can normal, student's t or bootstrap calibration be applied?

Journal

JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION
Volume 102, Issue 480, Pages 1282-1288

Publisher

AMER STATISTICAL ASSOC
DOI: 10.1198/016214507000000969

Keywords

Bonferroni's inequality; edgeworth expansion; genetic data; large-deviation expansion; level accuracy; microarray data; quantile estimation; skewness; student's t statistic

Funding

  1. Direct For Mathematical & Physical Scien [0906795] Funding Source: National Science Foundation
  2. Division Of Mathematical Sciences [0906795] Funding Source: National Science Foundation

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In the analysis of microarray data, and in some other contemporary statistical problems, it is not uncommon to apply hypothesis tests in a highly simultaneous way. The number, N say, of tests used can be much larger than the sample sizes, n, to which the tests are applied, yet we wish to calibrate the tests so that the overall level of the simultaneous test is accurate. Often the sampling distribution is quite different for each test, so there may not be an opportunity to combine data across samples. In this setting, how large can N be, as a function of n, before level accuracy becomes poor? Here we answer this question in cases where the statistic under test is of Student's t type. We show that if either the normal or Student t distribution is used for calibration, then the level of the simultaneous test is accurate provided that log N increases at a strictly slower rate than n(1/3) as n diverges. On the other hand, if bootstrap methods are used for calibration, then we may choose log N almost as large as n(1/2) and still achieve asymptotic-level accuracy. The implications of these results are explored both theoretically and numerically.

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