Related references
Note: Only part of the references are listed.Interplay of host genetics and gut microbiota underlying the onset and clinical presentation of inflammatory bowel disease
Floris Imhann et al.
GUT (2018)
Roles for Intestinal Bacteria, Viruses, and Fungi in Pathogenesis of Inflammatory Bowel Diseases and Therapeutic Approaches
R. Balfour Sartor et al.
GASTROENTEROLOGY (2017)
Genome-wide association study identifies distinct genetic contributions to prognosis and susceptibility in Crohn's disease
James C. Lee et al.
NATURE GENETICS (2017)
Fast and accurate HLA typing from short-read next-generation sequence data with xHLA
Chao Xie et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
VFDB 2016: hierarchical and refined dataset for big data analysis-10 years on
Lihong Chen et al.
NUCLEIC ACIDS RESEARCH (2016)
Reduced Abundance of Butyrate-Producing Bacteria Species in the Fecal Microbial Community in Crohn's Disease
Kenichiro Takahashi et al.
DIGESTION (2016)
Inherited determinants of Crohn's disease and ulcerative colitis phenotypes: a genetic association study
Isabelle Cleynen et al.
LANCET (2016)
Analysis of five chronic inflammatory diseases identifies 27 new associations and highlights disease-specific patterns at shared loci
David Ellinghaus et al.
NATURE GENETICS (2016)
Deep sequencing of 10,000 human genomes
Amalio Telenti et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Durable coexistence of donor and recipient strains after fecal microbiota transplantation
Simone S. Li et al.
SCIENCE (2016)
Dysbiosis, inflammation, and response to treatment: a longitudinal study of pediatric subjects with newly diagnosed inflammatory bowel disease
Kelly A. Shaw et al.
GENOME MEDICINE (2016)
Gut microbiota composition and Clostridium difficile infection in hospitalized elderly individuals: a metagenomic study
Christian Milani et al.
SCIENTIFIC REPORTS (2016)
An Integrative View of Microbiome-Host Interactions in Inflammatory Bowel Diseases
Marta Wlodarska et al.
CELL HOST & MICROBE (2015)
ConStrains identifies microbial strains in metagenomic datasets
Chengwei Luo et al.
NATURE BIOTECHNOLOGY (2015)
High-density mapping of the MHC identifies a shared role for HLA-DRB1☆01:03 in inflammatory bowel diseases and heterozygous advantage in ulcerative colitis
Philippe Goyette et al.
NATURE GENETICS (2015)
Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations
Jimmy Z. Liu et al.
NATURE GENETICS (2015)
Library preparation methodology can influence genomic and functional predictions in human microbiome research
Marcus B. Jones et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Associations between host gene expression, the mucosal microbiome, and clinical outcome in the pelvic pouch of patients with inflammatory bowel disease
Xochitl C. Morgan et al.
GENOME BIOLOGY (2015)
The Treatment-Naive Microbiome in New-Onset Crohn's Disease
Dirk Gevers et al.
CELL HOST & MICROBE (2014)
The Microbiome in Inflammatory Bowel Disease: Current Status and the Future Ahead
Aleksandar D. Kostic et al.
GASTROENTEROLOGY (2014)
A decrease of the butyrate-producing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis
Kathleen Machiels et al.
GUT (2014)
Diet rapidly and reproducibly alters the human gut microbiome
Lawrence A. David et al.
NATURE (2014)
Colonisation by Faecalibacterium prausnitzii and maintenance of clinical remission in patients with ulcerative colitis
E. Varela et al.
ALIMENTARY PHARMACOLOGY & THERAPEUTICS (2013)
Genomic variation landscape of the human gut microbiome
Siegfried Schloissnig et al.
NATURE (2013)
Microbiota of De-Novo Pediatric IBD: Increased Faecalibacterium Prausnitzii and Reduced Bacterial Diversity in Crohn's But Not in Ulcerative Colitis
Richard Hansen et al.
AMERICAN JOURNAL OF GASTROENTEROLOGY (2012)
MissForest-non-parametric missing value imputation for mixed-type data
Daniel J. Stekhoven et al.
BIOINFORMATICS (2012)
Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease
Luke Jostins et al.
NATURE (2012)
Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment
Xochitl C. Morgan et al.
GENOME BIOLOGY (2012)
The Commensal Microbiota and Enteropathogens in the Pathogenesis of Inflammatory Bowel Diseases
Benoit Chassaing et al.
GASTROENTEROLOGY (2011)
A Pyrosequencing Study in Twins Shows That Gastrointestinal Microbial Profiles Vary With Inflammatory Bowel Disease Phenotypes
Ben P. Willing et al.
GASTROENTEROLOGY (2010)
What is the expectation maximization algorithm?
Chuong B. Do et al.
NATURE BIOTECHNOLOGY (2008)
Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
Daniel N. Frank et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
MetaGene: prokaryotic gene finding from environmental genome shotgun sequences
Hideki Noguchi et al.
NUCLEIC ACIDS RESEARCH (2006)
Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach
C Manichanh et al.
GUT (2006)
Toward an integrated clinical, molecular and serological classification of inflammatory bowel disease: Report of a Working Party of the 2005 Montreal World Congress of Gastroenterology
Mark S. Silverberg et al.
CANADIAN JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY (2005)