Related references
Note: Only part of the references are listed.Reconstruction of Ancestral Genomes in Presence of Gene Gain and Loss
Pavel Avdeyev et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2016)
Reconstruction of an ancestral Yersinia pestis genome and comparison with an ancient sequence
Wandrille Duchemin et al.
BMC GENOMICS (2015)
Plague is an ancient pathogen
[Anonymous]
NATURE (2015)
Diverse Genotypes of Yersinia pestis Caused Plague in Madagascar in 2007
Julia M. Riehm et al.
PLOS NEGLECTED TROPICAL DISEASES (2015)
Yersinia pestis and Yersinia pseudotuberculosis infection: a regulatory RNA perspective
Luary C. Martinez-Chavarria et al.
FRONTIERS IN MICROBIOLOGY (2015)
GenBank
Dennis A. Benson et al.
NUCLEIC ACIDS RESEARCH (2015)
Early Divergent Strains of Yersinia pestis in Eurasia 5,000 Years Ago
Simon Rasmussen et al.
CELL (2015)
Chromosomal Rearrangement Features of Yersinia pestis Strains from Natural Plague Foci in China
Ying Liang et al.
AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE (2014)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
MLGO: phylogeny reconstruction and ancestral inference from gene-order data
Fei Hu et al.
BMC BIOINFORMATICS (2014)
Dynamics of CRISPR Loci in Microevolutionary Process of Yersinia pestis Strains
Maria Paloma S. Barros et al.
PLOS ONE (2014)
Probabilistic models for CRISPR spacer content evolution
Anne Kupczok et al.
BMC EVOLUTIONARY BIOLOGY (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Yersinia pestis Lineages in Mongolia
Julia M. Riehm et al.
PLOS ONE (2012)
Genome Sequence of the Deep-Rooted Yersinia pestis Strain Angola Reveals New Insights into the Evolution and Pangenome of the Plague Bacterium
Mark Eppinger et al.
JOURNAL OF BACTERIOLOGY (2010)
Genome Rearrangements of Completely Sequenced Strains of Yersinia pestis
Ying Liang et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2010)
GUIDANCE: a web server for assessing alignment confidence scores
Osnat Penn et al.
NUCLEIC ACIDS RESEARCH (2010)
Efficient Sampling of Parsimonious Inversion Histories with Application to Genome Rearrangement in Yersinia
Istvan Miklos et al.
GENOME BIOLOGY AND EVOLUTION (2009)
Trends in Prokaryotic Evolution Revealed by Comparison of Closely Related Bacterial and Archaeal Genomes
Pavel S. Novichkov et al.
JOURNAL OF BACTERIOLOGY (2009)
Insight into Microevolution of Yersinia pestis by Clustered Regularly Interspaced Short Palindromic Repeats
Yujun Cui et al.
PLOS ONE (2008)
Dynamics of Genome Rearrangement in Bacterial Populations
Aaron E. Darling et al.
PLOS GENETICS (2008)
Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516:: Evidence of gene reduction in an emerging pathogen
Patrick S. G. Chain et al.
JOURNAL OF BACTERIOLOGY (2006)
Application of phylogenetic networks in evolutionary studies
DH Huson et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies
C Pourcel et al.
MICROBIOLOGY-SGM (2005)
Genome sequence of Yersinia pestis KIM
W Deng et al.
JOURNAL OF BACTERIOLOGY (2002)
Bayesian phylogenetic inference from animal mitochondrial genome arrangements
B Larget et al.
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY (2002)
Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context
YI Wolf et al.
GENOME RESEARCH (2001)