4.7 Article

Insights into the ubiquitin-proteasome system of human embryonic stem cells

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Embryonic stem cells: a novel paradigm to study proteostasis?

Hyun Ju Lee et al.

FEBS JOURNAL (2017)

Article Cell Biology

Cellular differentiation state modulates the mRNA export activity of SR proteins

Valentina Botti et al.

JOURNAL OF CELL BIOLOGY (2017)

Article Cell & Tissue Engineering

The unique spliceosome signature of human pluripotent stem cells is mediated by SNRPA1, SNRPD1, and PNN

Young-Dae Kim et al.

STEM CELL RESEARCH (2017)

Review Cell Biology

Ubiquitin-Dependent Regulation of Stem Cell Biology

Achim Werner et al.

TRENDS IN CELL BIOLOGY (2017)

Review Biochemistry & Molecular Biology

Enzyme-substrate relationships in the ubiquitin system: approaches for identifying substrates of ubiquitin ligases

Hazel F. O'Connor et al.

CELLULAR AND MOLECULAR LIFE SCIENCES (2017)

Review Cell & Tissue Engineering

Proteostatic and Metabolic Control of Stemness

Laura Garcia-Prat et al.

CELL STEM CELL (2017)

Article Biochemistry & Molecular Biology

Regulation of c-Myc Expression by Ahnak Promotes Induced Pluripotent Stem Cell Generation

Hee Jung Lim et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2016)

Review Biochemistry & Molecular Biology

Systematic approaches to identify E3 ligase substrates

Mary Iconomou et al.

BIOCHEMICAL JOURNAL (2016)

Article Cell & Tissue Engineering

LIN28 Regulates Stem Cell Metabolism and Conversion to Primed Pluripotency

Jin Zhang et al.

CELL STEM CELL (2016)

Review Biochemistry & Molecular Biology

Functional and pathological relevance of HERC family proteins: a decade later

Susana Sanchez-Tena et al.

CELLULAR AND MOLECULAR LIFE SCIENCES (2016)

Review Cell Biology

Dynamic stem cell states: naive to primed pluripotency in rodents and humans

Leehee Weinberger et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2016)

Article Multidisciplinary Sciences

Somatic increase of CCT8 mimics proteostasis of human pluripotent stem cells and extends C-elegans lifespan

Alireza Noormohammadi et al.

NATURE COMMUNICATIONS (2016)

Article Cell Biology

RNAi Reveals Phase-Specific Global Regulators of Human Somatic Cell Reprogramming

Cheng-Xu Delon Toh et al.

CELL REPORTS (2016)

Article Biochemistry & Molecular Biology

The Deubiquitinase USP47 Stabilizes MAPK by Counteracting the Function of the N-end Rule ligase POE/UBR4 in Drosophila

Dariel Ashton-Beaucage et al.

PLOS BIOLOGY (2016)

Review Cell & Tissue Engineering

The Importance of Ubiquitination and Deubiquitination in Cellular Reprogramming

Bharathi Suresh et al.

STEM CELLS INTERNATIONAL (2016)

Review Biochemistry & Molecular Biology

The Biology of Proteostasis in Aging and Disease

Johnathan Labbadia et al.

ANNUAL REVIEW OF BIOCHEMISTRY, VOL 84 (2015)

Article Biochemistry & Molecular Biology

Zscan10 is dispensable for maintenance of pluripotency in mouse embryonic stem cells

Mariko Yamane et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2015)

Article Cell Biology

Role of the small subunit processome in the maintenance of pluripotent stem cells

Kwon Tae You et al.

GENES & DEVELOPMENT (2015)

Article Cell Biology

The nucleoporin Nup153 regulates embryonic stem cell pluripotency through gene silencing

Filipe V. Jacinto et al.

GENES & DEVELOPMENT (2015)

Review Biochemistry & Molecular Biology

The Mechanism and Function of Group II Chaperonins

Tom Lopez et al.

JOURNAL OF MOLECULAR BIOLOGY (2015)

Article Cell Biology

Aurora Kinase B Regulates Telomerase Activity via a Centromeric RNA in Stem Cells

Jan-Philipp Mallm et al.

CELL REPORTS (2015)

Article Biology

Neurl4 contributes to germ cell formation and integrity in Drosophila

Jennifer Jones et al.

BIOLOGY OPEN (2015)

Article Cell & Tissue Engineering

MFG-E8 Is Critical for Embryonic Stem Cell-Mediated T Cell Immunomodulation

Yuan Tan et al.

STEM CELL REPORTS (2015)

Review Cell & Tissue Engineering

Neural differentiation from embryonic stem cells in vitro: An overview of the signaling pathways

Jen-Hua Chuang et al.

WORLD JOURNAL OF STEM CELLS (2015)

Review Biochemistry & Molecular Biology

Regulation of proteasome activity in health and disease

Marion Schmidt et al.

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH (2014)

Article Biochemistry & Molecular Biology

Proteostatic Control of Telomerase Function through TRiC-Mediated Folding of TCAB1

Adam Freund et al.

Article Cell Biology

Identification and characterization of RING-finger ubiquitin ligase UBR7 in mammalian spermatozoa

Shawn W. Zimmerman et al.

CELL AND TISSUE RESEARCH (2014)

Review Biochemistry & Molecular Biology

Regulation of stem cell function by protein ubiquitylation

Alexandros Strikoudis et al.

EMBO REPORTS (2014)

Article Cell Biology

Telomerase-mediated telomere elongation from human blastocysts to embryonic stem cells

Sicong Zeng et al.

JOURNAL OF CELL SCIENCE (2014)

Article Biochemical Research Methods

Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ

Juergen Cox et al.

MOLECULAR & CELLULAR PROTEOMICS (2014)

Article Multidisciplinary Sciences

The WNT receptor FZD7 is required for maintenance of the pluripotent state in human embryonic stem cells

Antonio Fernandez et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Review Cell Biology

Proteostasis and aging of stem cells

David Vilchez et al.

TRENDS IN CELL BIOLOGY (2014)

Review Multidisciplinary Sciences

The role of protein clearance mechanisms in organismal ageing and age-related diseases

David Vilchez et al.

NATURE COMMUNICATIONS (2014)

Review Cell & Tissue Engineering

The proteasome complex and the maintenance of pluripotency: sustain the fate by mopping up?

Friederike Schroeter et al.

STEM CELL RESEARCH & THERAPY (2014)

Article Multidisciplinary Sciences

Identification of Protein Interaction Partners in Mammalian Cells Using SILAC-immunoprecipitation Quantitative Proteomics

Edward Emmott et al.

JOVE-JOURNAL OF VISUALIZED EXPERIMENTS (2014)

Article Biochemical Research Methods

STAR: ultrafast universal RNA-seq aligner

Alexander Dobin et al.

BIOINFORMATICS (2013)

Article Biochemistry & Molecular Biology

Double Nicking by RNA-Guided CRISPR Cas9 for Enhanced Genome Editing Specificity

F. Ann Ran et al.

Review Cell Biology

Sin3: Insight into its transcription regulatory functions

Rama Kadamb et al.

EUROPEAN JOURNAL OF CELL BIOLOGY (2013)

Article Biochemistry & Molecular Biology

HectD1 E3 Ligase Modifies Adenomatous Polyposis Coli (APC) with Polyubiquitin to Promote the APC-Axin Interaction

Hoanh Tran et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2013)

Article Biochemical Research Methods

Large-scale gene function analysis with the PANTHER classification system

Huaiyu Mi et al.

NATURE PROTOCOLS (2013)

Article Genetics & Heredity

Intellectual disability associated with a homozygous missense mutation in THOC6

Chandree L. Beaulieu et al.

ORPHANET JOURNAL OF RARE DISEASES (2013)

Article Multidisciplinary Sciences

Role of the ubiquitin ligase E6AP/UBE3A in controlling levels of the synaptic protein Arc

Simone Kuehnle et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Multidisciplinary Sciences

Multiplex Genome Engineering Using CRISPR/Cas Systems

Le Cong et al.

SCIENCE (2013)

Article Multidisciplinary Sciences

Removal of damaged proteins during ES cell fate specification requires the proteasome activator PA28

Malin Hernebring et al.

SCIENTIFIC REPORTS (2013)

Review Biochemistry & Molecular Biology

The N-End Rule Pathway

Takafumi Tasaki et al.

ANNUAL REVIEW OF BIOCHEMISTRY, VOL 81 (2012)

Article Biochemistry & Molecular Biology

LIN28A Is a Suppressor of ER-Associated Translation in Embryonic Stem Cells

Jun Cho et al.

Editorial Material Cell & Tissue Engineering

UPS Delivers Pluripotency

Yasutaka Okita et al.

CELL STEM CELL (2012)

Article Cell & Tissue Engineering

Regulation of Pluripotency and Cellular Reprogramming by the Ubiquitin-Proteasome System

Shannon M. Buckley et al.

CELL STEM CELL (2012)

Review Cell & Tissue Engineering

Metabolic Regulation in Pluripotent Stem Cells during Reprogramming and Self-Renewal

Jin Zhang et al.

CELL STEM CELL (2012)

Article Cell Biology

HECT and RING finger families of E3 ubiquitin ligases at a glance

Meredith B. Metzger et al.

JOURNAL OF CELL SCIENCE (2012)

Article Biochemistry & Molecular Biology

RNF20 and USP44 Regulate Stem Cell Differentiation by Modulating H2B Monoubiquitylation

Gilad Fuchs et al.

MOLECULAR CELL (2012)

Article Biochemistry & Molecular Biology

LIN28 Binds Messenger RNAs at GGAGA Motifs and Regulates Splicing Factor Abundance

Melissa L. Wilbert et al.

MOLECULAR CELL (2012)

Article Multidisciplinary Sciences

Increased proteasome activity in human embryonic stem cells is regulated by PSMD11

David Vilchez et al.

NATURE (2012)

Article Multidisciplinary Sciences

RPN-6 determines C. elegans longevity under proteotoxic stress conditions

David Vilchez et al.

NATURE (2012)

Article Biochemical Research Methods

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

Cole Trapnell et al.

NATURE PROTOCOLS (2012)

Article Multidisciplinary Sciences

Requirement of Mouse BCCIP for Neural Development and Progenitor Proliferation

Yi-Yuan Huang et al.

PLOS ONE (2012)

Article Multidisciplinary Sciences

The proteasomal subunit Rpn6 is a molecular clamp holding the core and regulatory subcomplexes together

Ganesh Ramnath Pathare et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Biochemistry & Molecular Biology

Modulation of chromatin modifying factors' gene expression in embryonic and induced pluripotent stem cells

Carlos Luzzani et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2011)

Review Biochemistry & Molecular Biology

Ubiquitination of E3 ligases: self-regulation of the ubiquitin system via proteolytic and non-proteolytic mechanisms

P. de Bie et al.

CELL DEATH AND DIFFERENTIATION (2011)

Article Biochemistry & Molecular Biology

p125/Sec23-interacting protein (Sec23ip) is required for spermiogenesis

Nagisa Arimitsu et al.

FEBS LETTERS (2011)

Article Biochemistry & Molecular Biology

Physical and Functional Interaction of the HECT Ubiquitin-protein Ligases E6AP and HERC2

Simone Kuehnle et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2011)

Article Multidisciplinary Sciences

Asymmetric cell divisions promote Notch-dependent epidermal differentiation

Scott E. Williams et al.

NATURE (2011)

Article Multidisciplinary Sciences

Energy Metabolism in Human Pluripotent Stem Cells and Their Differentiated Counterparts

Sandra Varum et al.

PLOS ONE (2011)

Article Biochemical Research Methods

Landscape of the SOX2 protein-protein interactome

Xuefeng Fang et al.

PROTEOMICS (2011)

Article Genetics & Heredity

Prader-Willi Syndrome and Angelman Syndrome

Karin Buiting

AMERICAN JOURNAL OF MEDICAL GENETICS PART C-SEMINARS IN MEDICAL GENETICS (2010)

Review Biochemistry & Molecular Biology

The multiple levels of regulation by p53 ubiquitination

J. T. Lee et al.

CELL DEATH AND DIFFERENTIATION (2010)

Article Multidisciplinary Sciences

Cytoplasmic protein quality control degradation mediated by parallel actions of the E3 ubiquitin ligases Ubr1 and San1

Jarrod W. Heck et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Review Biochemistry & Molecular Biology

Biological and Chemical Approaches to Diseases of Proteostasis Deficiency

Evan T. Powers et al.

ANNUAL REVIEW OF BIOCHEMISTRY (2009)

Review Biochemistry & Molecular Biology

Recognition and Processing of Ubiquitin-Protein Conjugates by the Proteasome

Daniel Finley

ANNUAL REVIEW OF BIOCHEMISTRY (2009)

Article Biochemistry & Molecular Biology

Telomere length maintenance in stem cell populations

Nicholas D. Allen et al.

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE (2009)

Article Biotechnology & Applied Microbiology

A gene expression signature shared by human mature oocytes and embryonic stem cells

Said Assou et al.

BMC GENOMICS (2009)

Article Cell Biology

Regulation of p53 TRIM24 enters the RING

Abhinav K. Jain et al.

CELL CYCLE (2009)

Article Multidisciplinary Sciences

Detection of sequential polyubiquitylation on a millisecond timescale

Nathan W. Pierce et al.

NATURE (2009)

Article Biotechnology & Applied Microbiology

Highly efficient neural conversion of human ES and iPS cells by dual inhibition of SMAD signaling

Stuart M. Chambers et al.

NATURE BIOTECHNOLOGY (2009)

Article Neurosciences

UBE3A/E6-AP regulates cell proliferation by promoting proteasomal degradation of p27

Amit Mishra et al.

NEUROBIOLOGY OF DISEASE (2009)

Review Multidisciplinary Sciences

Understanding the Warburg Effect: The Metabolic Requirements of Cell Proliferation

Matthew G. Vander Heiden et al.

SCIENCE (2009)

Review Biochemistry & Molecular Biology

Stem cells, the molecular circuitry of pluripotency and nuclear reprogramming

Rudolf Jaenisch et al.

News Item Cell & Tissue Engineering

Global transcription in pluripotent embryonic stem cells

Sol Efroni et al.

CELL STEM CELL (2008)

Review Multidisciplinary Sciences

Adapting proteostasis for disease intervention

William E. Balch et al.

SCIENCE (2008)

Article Biochemistry & Molecular Biology

Induction of pluripotent stem cells from adult human fibroblasts by defined factors

Kazutoshi Takahashi et al.

Article Multidisciplinary Sciences

HDAC6 rescues neurodegeneration and provides an essential link between autophagy and the UPS

Udai Bhan Pandey et al.

NATURE (2007)

Article Multidisciplinary Sciences

Elimination of damaged proteins during differentiation of embryonic stem cells

Malin Hernebring et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemistry & Molecular Biology

Molecular recognition of p53 and MDM2 by USP7/HAUSP

Y Sheng et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2006)

Article Biochemistry & Molecular Biology

FIGC, a novel FGF-induced ubiquitin-protein ligase in gastric cancers

JH Jang

FEBS LETTERS (2004)

Review Cell Biology

Dynactin

TA Schroer

ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY (2004)

Article Oncology

The proteasome: structure, function, and role in the cell

J Adams

CANCER TREATMENT REVIEWS (2003)

Article Biochemistry & Molecular Biology

Cytoscape: A software environment for integrated models of biomolecular interaction networks

P Shannon et al.

GENOME RESEARCH (2003)

Article Biochemistry & Molecular Biology

The hPLIC proteins may provide a link between the ubiquitination machinery and the proteasome

MF Kleijnen et al.

MOLECULAR CELL (2000)