Related references
Note: Only part of the references are listed.In-silico screening and experimental validation reveal L-Adrenaline as anti-biofilm molecule against biofilm-associated protein (Bap) producing Acinetobacter baumannii
Vishvanath Tiwari et al.
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2018)
Rationale and design of an inhibitor of RecA protein as an inhibitor of Acinetobacter baumannii
Vishvanath Tiwari et al.
JOURNAL OF ANTIBIOTICS (2018)
Prediction and analysis of promiscuous T cell-epitopes derived from the vaccine candidate antigens of Leishmania donovani binding to MHC class-II alleles using in silico approach
Manju Kashyap et al.
INFECTION GENETICS AND EVOLUTION (2017)
An In Silico Identification of Common Putative Vaccine Candidates against Treponema pallidum: A Reverse Vaccinology and Subtractive Genomics Based Approach
Arun Kumar Jaiswal et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2017)
Effect of secondary metabolite of Actinidia deliciosa on the biofilm and extra-cellular matrix components of Acinetobacter baumannii
Vishvanath Tiwari et al.
MICROBIAL PATHOGENESIS (2017)
In Silico Analysis of Epitope-Based Vaccine Candidates against Hepatitis B Virus Polymerase Protein
Juzeng Zheng et al.
VIRUSES-BASEL (2017)
Vaccinomics Approach for Designing Potential Peptide Vaccine by Targeting Shigella spp. Serine Protease Autotransporter Subfamily Protein SigA
Arafat Rahman Oany et al.
JOURNAL OF IMMUNOLOGY RESEARCH (2017)
Polyvinylpyrrolidone-capped silver nanoparticle inhibits infection of carbapenem-resistant strain of Acinetobacter baumannii in the human Pulmonary epithelial cell
Vishvanath Tiwari et al.
FRONTIERS IN IMMUNOLOGY (2017)
Identification of putative drug targets in Vancomycin-resistant Staphylococcus aureus (VRSA) using computer aided protein data analysis
Md Anayet Hasan et al.
GENE (2016)
A multi-subunit based, thermodynamically stable model vaccine using combined immunoinformatics and protein structure based approach
Aarti Rana et al.
IMMUNOBIOLOGY (2016)
Screening of Herbal-Based Bioactive Extract Against Carbapenem-Resistant Strain of Acinetobacter baumannii
Monalisa Tiwari et al.
MICROBIAL DRUG RESISTANCE (2016)
Antibiotic-Resistant Acinetobacter baumannii Increasing Success Remains a Challenge as a Nosocomial Pathogen
Ana Maria Gonzalez-Villoria et al.
JOURNAL OF PATHOGENS (2016)
Designing and in Silico Analysis of PorB Protein from Chlamydia Trachomatis for Developing a Vaccine Candidate
M. Pourhajibagher et al.
DRUG RESEARCH (2016)
Immunological evaluation of OMV(PagL)+Bap(1-487aa) and AbOmpA(8-346aa)+Bap(1-487aa) as vaccine candidates against Acinetobacter baumannii sepsis infection
Farzad Badmasti et al.
MOLECULAR IMMUNOLOGY (2015)
Improving Multi-Epitope Long Peptide Vaccine Potency by Using a Strategy that Enhances CD4+T Help in BALB/c Mice
Haniyeh Ghaffari-Nazari et al.
PLOS ONE (2015)
In silico design of a DNA-based HIV-1 multi-epitope vaccine for Chinese populations
Yi Yang et al.
HUMAN VACCINES & IMMUNOTHERAPEUTICS (2015)
Antimicrobial active herbal compounds against Acinetobacter baumannii and other pathogens
Vishvanath Tiwari et al.
FRONTIERS IN MICROBIOLOGY (2015)
ARG-ANNOT, a New Bioinformatic Tool To Discover Antibiotic Resistance Genes in Bacterial Genomes
Sushim Kumar Gupta et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2014)
Evolutionary Analysis and Prediction of Peptide Vaccine Candidates for Foot-and-Mouth-Disease Virus Types A and O in Bangladesh
Samina Momtaz et al.
EVOLUTIONARY BIOINFORMATICS (2014)
Conformational stability of OXA-51 beta-lactamase explains its role in carbapenem resistance of Acinetobacter baumannii
Vishvanath Tiwari et al.
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS (2014)
De Novo Structure Prediction of Globular Proteins Aided by Sequence Variation-Derived Contacts
Tomasz Kosciolek et al.
PLOS ONE (2014)
Identification of Druggable Targets for Acinetobacter baumannii Via Subtractive Genomics and Plausible Inhibitors for MurA and MurB
Navkiran Kaur et al.
APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY (2013)
MHCcluster, a method for functional clustering of MHC molecules
Martin Thomsen et al.
IMMUNOGENETICS (2013)
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
Koichiro Tamura et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
CMG-Biotools, a Free Workbench for Basic Comparative Microbial Genomics
Tammi Vesth et al.
PLOS ONE (2013)
In Silico Approach for Predicting Toxicity of Peptides and Proteins
Sudheer Gupta et al.
PLOS ONE (2013)
Identification of Novel Vaccine Candidates against Multidrug-Resistant Acinetobacter baumannii
Danilo G. Moriel et al.
PLOS ONE (2013)
Properties of MHC Class I Presented Peptides That Enhance Immunogenicity
Jorg J. A. Calis et al.
PLOS COMPUTATIONAL BIOLOGY (2013)
In-silico modeling of a novel OXA-51 from β-lactam-resistant Acinetobacter baumannii and its interaction with various antibiotics
Vishvanath Tiwari et al.
JOURNAL OF MOLECULAR MODELING (2012)
Carbapenem-hydrolyzing oxacillinase in high resistant strains of Acinetobacter baumannii isolated from India
Vishvanath Tiwari et al.
MICROBIAL PATHOGENESIS (2012)
Immune epitope database analysis resource
Yohan Kim et al.
NUCLEIC ACIDS RESEARCH (2012)
β-defensin 2 as an Adjuvant Promotes Anti-Melanoma Immune Responses and Inhibits the Growth of Implanted Murine Melanoma In Vivo
Han-fang Mei et al.
PLOS ONE (2012)
Comparative Proteomics of Inner Membrane Fraction from Carbapenem-Resistant Acinetobacter baumannii with a Reference Strain
Vishvanath Tiwari et al.
PLOS ONE (2012)
A review of vaccine development and research for industry animals in Korea
Nak-Hyung Lee et al.
CLINICAL AND EXPERIMENTAL VACCINE RESEARCH (2012)
DrugBank 3.0: a comprehensive resource for 'Omics' research on drugs
Craig Knox et al.
NUCLEIC ACIDS RESEARCH (2011)
High-throughput prediction of protein antigenicity using protein microarray data
Christophe N. Magnan et al.
BIOINFORMATICS (2010)
PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes
Nancy Y. Yu et al.
BIOINFORMATICS (2010)
CD-HIT Suite: a web server for clustering and comparing biological sequences
Ying Huang et al.
BIOINFORMATICS (2010)
VITCOMIC: visualization tool for taxonomic compositions of microbial communities based on 16S rRNA gene sequences
Hiroshi Mori et al.
BMC BIOINFORMATICS (2010)
Peptide binding predictions for HLA DR, DP and DQ molecules
Peng Wang et al.
BMC BIOINFORMATICS (2010)
Improving therapeutic HPV peptide-based vaccine potency by enhancing CD4+ T help and dendritic cell activation
Chao-Yi Wu et al.
JOURNAL OF BIOMEDICAL SCIENCE (2010)
A novel strategy of epitope design in Neisseria gonorrhoeae
Debmalya Barh et al.
BIOINFORMATION (2010)
SOLpro: accurate sequence-based prediction of protein solubility
Christophe N. Magnan et al.
BIOINFORMATICS (2009)
ElliPro: a new structure-based tool for the prediction of antibody epitopes
Julia Ponomarenko et al.
BMC BIOINFORMATICS (2008)
Predicting linear B-cell epitopes using string kernels
Yasser El-Manzalawy et al.
JOURNAL OF MOLECULAR RECOGNITION (2008)
NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11
Claus Lundegaard et al.
NUCLEIC ACIDS RESEARCH (2008)
A systematic assessment of MHC class II peptide binding predictions and evaluation of a consensus approach
Peng Wang et al.
PLOS COMPUTATIONAL BIOLOGY (2008)
Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction
Mette V. Larsen et al.
BMC BIOINFORMATICS (2007)
Antibody-protein interactions: benchmark datasets and prediction tools evaluation
Julia V. Ponomarenko et al.
BMC STRUCTURAL BIOLOGY (2007)
Development of an epitope conservancy analysis tool to facilitate the design of epitope-based diagnostics and vaccines
Huynh-Hoa Bui et al.
BMC BIOINFORMATICS (2007)
RNAmmer:: consistent and rapid annotation of ribosomal RNA genes
Karin Lagesen et al.
NUCLEIC ACIDS RESEARCH (2007)
VaxiJen: a server for prediction of protective antigens, tumour antigens and subunit vaccines
Irini A. Doytchinova et al.
BMC BIOINFORMATICS (2007)
AlgPred: prediction of allergenic proteins and mapping of IgE epitopes
Sudipto Saha et al.
NUCLEIC ACIDS RESEARCH (2006)
JCat:: a novel tool to adapt codon usage of a target gene to its potential expression host
A Grote et al.
NUCLEIC ACIDS RESEARCH (2005)
VFDB: a reference database for bacterial virulence factors
LH Chen et al.
NUCLEIC ACIDS RESEARCH (2005)
Reliable prediction of T-cell epitopes using neural networks with novel sequence representations
M Nielsen et al.
PROTEIN SCIENCE (2003)
Toll-like receptor 4-dependent activation of dendritic cells by β-defensin 2
A Biragyn et al.
SCIENCE (2002)
KEGG: Kyoto Encyclopedia of Genes and Genomes
M Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2000)