4.8 Article

O2 evolution and recovery of the water-oxidizing enzyme

Journal

NATURE COMMUNICATIONS
Volume 9, Issue -, Pages -

Publisher

NATURE PUBLISHING GROUP
DOI: 10.1038/s41467-018-03545-w

Keywords

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Funding

  1. JST CREST [JPMJCR1656]
  2. JSPS KAKENHI [JP26800224, JP16H06560, JP26105012]
  3. Japan Agency for Medical Research and Development (AMED)
  4. Materials Integration for engineering polymers of Cross-ministerial Strategic Innovation Promotion Program (SIP)
  5. Interdisciplinary Computational Science Program in CCS, University of Tsukuba
  6. Grants-in-Aid for Scientific Research [16H06560, 26800224] Funding Source: KAKEN

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In photosystem II, light-induced water oxidation occurs at the Mn4CaO5 cluster. Here we demonstrate proton releases, dioxygen formation, and substrate water incorporation in response to Mn4CaO5 oxidation in the protein environment, using a quantum mechanical/molecular mechanical approach and molecular dynamics simulations. In S-2, H2O at the W1 site forms a low-barrier H-bond with D1-Asp61. In the S-2-to-S-3 transition, oxidation of OW1H- to O-W1(center dot-), concerted proton transfer from OW1H- to D1-Asp61, and binding of a water molecule Wn-W1 at O-W1(center dot-) are observed. In S-4, Wn-W1 facilitates oxo-oxyl radical coupling between O-W1(center dot-) and corner mu-oxo O4. Deprotonation via D1-Asp61 leads to formation of O-W1=O4. As O-W1=O4 moves away from Mn, H2O at W539 is incorporated into the vacant O4 site of the O-2-evolved Mn4CaO4 cluster, forming a mu-oxo bridge (Mn3-O-W539-Mn4) in an exergonic process. Simultaneously, Wn-W1 is incorporated as W1, recovering the Mn4CaO5 cluster.

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