4.6 Article

Plant DNA metabarcoding of lake sediments: How does it represent the contemporary vegetation

Related references

Note: Only part of the references are listed.
Review Plant Sciences

Ancient plant DNA in lake sediments

Laura Parducci et al.

NEW PHYTOLOGIST (2017)

Review Biodiversity Conservation

The ecology of environmental DNA and implications for conservation genetics

Matthew A. Barnes et al.

CONSERVATION GENETICS (2016)

Article Biochemistry & Molecular Biology

Statistical approaches to account for false-positive errors in environmental DNA samples

Jose J. Lahoz-Monfort et al.

MOLECULAR ECOLOGY RESOURCES (2016)

Article Biochemistry & Molecular Biology

Quantification of mesocosm fish and amphibian species diversity via environmental DNA metabarcoding

Nathan T. Evans et al.

MOLECULAR ECOLOGY RESOURCES (2016)

Article Biochemistry & Molecular Biology

OBITOOLS: a UNIX-inspired software package for DNA metabarcoding

Frederic Boyer et al.

MOLECULAR ECOLOGY RESOURCES (2016)

Article Biochemistry & Molecular Biology

From barcodes to genomes: extending the concept of DNA barcoding

Eric Coissac et al.

MOLECULAR ECOLOGY (2016)

Article Biochemistry & Molecular Biology

Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding

Alice Valentini et al.

MOLECULAR ECOLOGY (2016)

Article Multidisciplinary Sciences

Postglacial viability and colonization in North America's ice-free corridor

Mikkel W. Pedersen et al.

NATURE (2016)

Review Plant Sciences

Does pollen-assemblage richness reflect floristic richness? A review of recent developments and future challenges

H. John B. Birks et al.

REVIEW OF PALAEOBOTANY AND PALYNOLOGY (2016)

Article Biodiversity Conservation

Choice of capture and extraction methods affect detection of freshwater biodiversity from environmental DNA

Kristy Deiner et al.

BIOLOGICAL CONSERVATION (2015)

Article Biodiversity Conservation

Quantifying effects of UV-B, temperature, and pH on eDNA degradation in aquatic microcosms

Katherine M. Strickler et al.

BIOLOGICAL CONSERVATION (2015)

Article Biodiversity Conservation

Environmental DNA - An emerging tool in conservation for monitoring past and present biodiversity

Philip Francis Thomsen et al.

BIOLOGICAL CONSERVATION (2015)

Article Geography, Physical

The current and future applications of ancient DNA in Quaternary science

Terence A. Brown et al.

JOURNAL OF QUATERNARY SCIENCE (2015)

Review Genetics & Heredity

Origin, dynamics, and implications of extracellular DNA pools in marine sediments

Andrea Torti et al.

MARINE GENOMICS (2015)

Article Biochemistry & Molecular Biology

Reconstructing long-term human impacts on plant communities: an ecological approach based on lake sediment DNA

Johan Pansu et al.

MOLECULAR ECOLOGY (2015)

Article Multidisciplinary Sciences

Sedimentary DNA from a submerged site reveals wheat in the British Isles 8000 years ago

Oliver Smith et al.

SCIENCE (2015)

Article Plant Sciences

Parsing ecological signal from noise in next generation amplicon sequencing

Nhu H. Nguyen et al.

NEW PHYTOLOGIST (2015)

Article Biochemistry & Molecular Biology

Efficient and sensitive identification and quantification of airborne pollen using next-generation DNA sequencing

Ken Kraaijeveld et al.

MOLECULAR ECOLOGY RESOURCES (2015)

Article Biochemistry & Molecular Biology

Replication levels, false presences and the estimation of the presence/absence from eDNA metabarcoding data

Gentile F. Ficetola et al.

MOLECULAR ECOLOGY RESOURCES (2015)

Article Multidisciplinary Sciences

Highly Overlapping Winter Diet in Two Sympatric Lemming Species Revealed by DNA Metabarcoding

Eeva M. Soininen et al.

PLOS ONE (2015)

Article Biology

Proxy comparison in ancient peat sediments: pollen, macrofossil and plant DNA

Laura Parducci et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2015)

Review Biology

Ancient and modern environmental DNA

Mikkel Winther Pedersen et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2015)

Review Ecology

Using Ancient DNA to Understand Evolutionary and Ecological Processes

Ludovic Orlando et al.

ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS, VOL 45 (2014)

Article Biodiversity Conservation

Use of Pollen and Ancient DNA as Conservation Baselines for Offshore Islands in New Zealand

Janet M. Wilmshurst et al.

CONSERVATION BIOLOGY (2014)

Article Biodiversity Conservation

Use of Ancient Sedimentary DNA as a Novel Conservation Tool for High-Altitude Tropical Biodiversity

Sanne Boessenkool et al.

CONSERVATION BIOLOGY (2014)

Article Engineering, Environmental

Environmental Conditions Influence eDNA Persistence in Aquatic Systems

Matthew A. Barnes et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2014)

Review Geography, Physical

Using palaeoenvironmental DNA to reconstruct past environments: progress and prospects

Nicolas J. Rawlence et al.

JOURNAL OF QUATERNARY SCIENCE (2014)

Article Biochemistry & Molecular Biology

DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet

M. De Barba et al.

MOLECULAR ECOLOGY RESOURCES (2014)

Article Multidisciplinary Sciences

Fifty thousand years of Arctic vegetation and megafaunal diet

Eske Willerslev et al.

NATURE (2014)

Article Multidisciplinary Sciences

Transport Distance of Invertebrate Environmental DNA in a Natural River

Kristy Deiner et al.

PLOS ONE (2014)

Article Multidisciplinary Sciences

Long livestock farming history and human landscape shaping revealed by lake sediment DNA

Charline Giguet-Covex et al.

NATURE COMMUNICATIONS (2014)

Article Biochemistry & Molecular Biology

Molecular- and pollen-based vegetation analysis in lake sediments from central Scandinavia

Laura Parducci et al.

MOLECULAR ECOLOGY (2013)

Article Biochemistry & Molecular Biology

Plant species richness belowground: higher richness and new patterns revealed by next-generation sequencing

Inga Hiiesalu et al.

MOLECULAR ECOLOGY (2012)

Article Biochemistry & Molecular Biology

Meta-barcoding of 'dirt' DNA from soil reflects vertebrate biodiversity

Kenneth Andersen et al.

MOLECULAR ECOLOGY (2012)

Review Biochemistry & Molecular Biology

The future of environmental DNA in ecology

Nigel G. Yoccoz

MOLECULAR ECOLOGY (2012)

Article Biochemistry & Molecular Biology

DNA from soil mirrors plant taxonomic and growth form diversity

N. G. Yoccoz et al.

MOLECULAR ECOLOGY (2012)

Article Biochemistry & Molecular Biology

Towards next-generation biodiversity assessment using DNA metabarcoding

Pierre Taberlet et al.

MOLECULAR ECOLOGY (2012)

Article Multidisciplinary Sciences

Glacial Survival of Boreal Trees in Northern Scandinavia

Laura Parducci et al.

SCIENCE (2012)

Editorial Material Multidisciplinary Sciences

Comment on Glacial Survival of Boreal Trees in Northern Scandinavia

Hilary H. Birks et al.

SCIENCE (2012)

Editorial Material Multidisciplinary Sciences

Response to Comment on Glacial Survival of Boreal Trees in Northern Scandinavia

Laura Parducci et al.

SCIENCE (2012)

Article Multidisciplinary Sciences

Choosing and Using a Plant DNA Barcode

Peter M. Hollingsworth et al.

PLOS ONE (2011)

Article Plant Sciences

Palynological richness and pollen sample evenness in relation to local floristic diversity in southern Estonia

Vivika Meltsov et al.

REVIEW OF PALAEOBOTANY AND PALYNOLOGY (2011)

Article Ecology

Correspondence analysis of raw data

Michael Greenacre

ECOLOGY (2010)

Article Biochemistry & Molecular Biology

Using next-generation sequencing for molecular reconstruction of past Arctic vegetation and climate

J. H. Sonstebo et al.

MOLECULAR ECOLOGY RESOURCES (2010)

Article Multidisciplinary Sciences

A DNA barcode for land plants

Peter M. Hollingsworth et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Review Geography, Physical

Holocene vegetation and climate dynamics of the boreal alpine ecotone of northwestern Fennoscandia

Christin Jensen et al.

JOURNAL OF QUATERNARY SCIENCE (2008)

Article Biochemistry & Molecular Biology

Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding

Pierre Taberlet et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biodiversity Conservation

Using niche-based models to improve the sampling of rare species

A Guisan et al.

CONSERVATION BIOLOGY (2006)