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Towards a complete map of the human long non-coding RNA transcriptome

Journal

NATURE REVIEWS GENETICS
Volume 19, Issue 9, Pages 535-548

Publisher

NATURE PORTFOLIO
DOI: 10.1038/s41576-018-0017-y

Keywords

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Funding

  1. Swiss National Science Foundation through the National Centres for Competence in Research (NCCR) 'RNA Disease'
  2. Medical Faculty of the University Hospital
  3. University of Bern
  4. Wellcome Trust [WT098051, WT108749/Z/15/Z]
  5. National Human Genome Research Institute (NHGRI) [U41HG007234, 2U41HG007234]
  6. European Molecular Biology Laboratory
  7. National Human Genome Research Institute of the US National Institutes of Health [U41HG007234, U41HG007000, U54HG007004]
  8. National Human Genome Research Institute [U41HG007234, U54HG007000, R01MH101814]
  9. Spanish Ministry of Economy and Competitiveness, 'Centro de Excelencia Severo Ochoa'
  10. CERCA Programme/Generalitat de Catalunya

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Gene maps, or annotations, enable us to navigate the functional landscape of our genome. They are a resource upon which virtually all studies depend, from single-gene to genome-wide scales and from basic molecular biology to medical genetics. Yet present-day annotations suffer from trade-offs between quality and size, with serious but often unappreciated consequences for downstream studies. This is particularly true for long non-coding RNAs (lncRNAs), which are poorly characterized compared to protein-coding genes. Long-read sequencing technologies promise to improve current annotations, paving the way towards a complete annotation of lncRNAs expressed throughout a human lifetime.

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