Related references
Note: Only part of the references are listed.Extended Zinc AMBER Force Field (EZAFF)
Zhuoqin Yu et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2018)
CHARMM36m: an improved force field for folded and intrinsically disordered proteins
Jing Huang et al.
NATURE METHODS (2017)
How Ligands Illuminate GPCR Molecular Pharmacology
Daniel Wacker et al.
CELL (2017)
Molecular mechanism of Zn2+ inhibition of a voltage-gated proton channel
Feng Qiu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Molecular Interactions between Tarantula Toxins and Low-Voltage-Activated Calcium Channels
Autoosa Salari et al.
SCIENTIFIC REPORTS (2016)
Proton currents constrain structural models of voltage sensor activation
Aaron L. Randolph et al.
ELIFE (2016)
Allosteric Effects of Sodium Ion Binding on Activation of the M3 Muscarinic G-Protein-Coupled Receptor
Yinglong Miao et al.
BIOPHYSICAL JOURNAL (2015)
Buried ionizable networks are an ancient hallmark of G protein-coupled receptor activation
Daniel G. Isom et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Resting state of the human proton channel dimer in a lipid bilayer
Qufei Li et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Sodium Ion Binding Pocket Mutations and Adenosine A2A Receptor Function
Arnault Massink et al.
MOLECULAR PHARMACOLOGY (2015)
Mechanistic Insights into the Allosteric Modulation of Opioid Receptors by Sodium Ions
Yi Shang et al.
BIOCHEMISTRY (2014)
The role of protein-bound water molecules in microbial rhodopsins
Klaus Gerwert et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2014)
Hv1 Proton Channel Opening Is Preceded by a Voltage-independent Transition
Carlos A. Villalba-Galea
BIOPHYSICAL JOURNAL (2014)
X-ray crystal structure of voltage-gated proton channel
Kohei Takeshita et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2014)
Hydrophobic plug functions as a gate in voltage-gated proton channels
Adam Chamberlin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Moving gating charges through the gating pore in a Kv channel voltage sensor
Jerome J. Lacroix et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Allosteric sodium in class A GPCR signaling
Vsevolod Katritch et al.
TRENDS IN BIOCHEMICAL SCIENCES (2014)
Zinc Coordination Spheres in Protein Structures
Mikko Laitaoja et al.
INORGANIC CHEMISTRY (2013)
Optimization of the Additive CHARMM All-Atom Protein Force Field Targeting Improved Sampling of the Backbone φ, ψ and Side-Chain χ1 and χ2 Dihedral Angles
Robert B. Best et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2012)
Improving the CHARMM Force Field for Polyunsaturated Fatty Acid Chains
Jeffery B. Klauda et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2012)
A Voltage-Gated H+ Channel Underlying pH Homeostasis in Calcifying Coccolithophores
Alison R. Taylor et al.
PLOS BIOLOGY (2011)
Acid Extrusion from Human Spermatozoa Is Mediated by Flagellar Voltage-Gated Proton Channel
Polina V. Lishko et al.
CELL (2010)
The Role and Structure of the Carboxyl-terminal Domain of the Human Voltage-gated Proton Channel Hv1
Shu Jie Li et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types
Jeffery B. Klauda et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2010)
The role of Hv1 and CatSper channels in sperm activation
Polina V. Lishko et al.
JOURNAL OF PHYSIOLOGY-LONDON (2010)
Zinc inhibition of monomeric and dimeric proton channels suggests cooperative gating
Boris Musset et al.
JOURNAL OF PHYSIOLOGY-LONDON (2010)
An aqueous H+ permeation pathway in the voltage-gated proton channel Hv1
I. Scott Ramsey et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2010)
Interactions between lipids and voltage sensor paddles detected with tarantula toxins
Mirela Milescu et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2009)
Sensing voltage across lipid membranes
Kenton J. Swartz
NATURE (2008)
Portability of paddle motif function and pharmacology in voltage sensors
AbdulRasheed A. Alabi et al.
NATURE (2007)
MultiSeq: unifying sequence and structure data for evolutionary analysis
Elijah Roberts et al.
BMC BIOINFORMATICS (2006)
A voltage sensor-domain protein is a voltage-gated proton channel
M Sasaki et al.
SCIENCE (2006)
A voltage-gated proton-selective channel lacking the pore domain
IS Ramsey et al.
NATURE (2006)
Multiple Alignment of protein structures and sequences for VMD
J Eargle et al.
BIOINFORMATICS (2006)
Improved treatment of the protein backbone in empirical force fields
AD MacKerell et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2004)
First-second shell interactions in metal binding sites in proteins: A PDB survey and DFT/CDM calculations
T Dudev et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2003)