Related references
Note: Only part of the references are listed.A case controlled study examining the bladder microbiome in women with Overactive Bladder (OAB) and healthy controls
Natasha Curtiss et al.
EUROPEAN JOURNAL OF OBSTETRICS & GYNECOLOGY AND REPRODUCTIVE BIOLOGY (2017)
The resilience of the intestinal microbiota influences health and disease
Felix Sommer et al.
NATURE REVIEWS MICROBIOLOGY (2017)
The Human Gut Phage Community and Its Implications for Health and Disease
Pilar Manrique et al.
VIRUSES-BASEL (2017)
Prophage-mediated defence against viral attack and viral counter-defence
Rebekah M. Dedrick et al.
NATURE MICROBIOLOGY (2017)
The biology of JC polyomavirus
Benedetta Assetta et al.
BIOLOGICAL CHEMISTRY (2017)
The female urinary microbiota, urinary health and common urinary disorders
Linda Brubaker et al.
ANNALS OF TRANSLATIONAL MEDICINE (2017)
Incontinence medication response relates to the female urinary microbiota
Krystal J. Thomas-White et al.
INTERNATIONAL UROGYNECOLOGY JOURNAL (2016)
Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation
Nuala A. O'Leary et al.
NUCLEIC ACIDS RESEARCH (2016)
Prophages of the genus Bifidobacterium as modulating agents of the infant gut microbiota
Gabriele Andrea Lugli et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Genetic and life-history traits associated with the distribution of prophages in bacteria
Marie Touchon et al.
ISME JOURNAL (2016)
Prophages mediate defense against phage infection through diverse mechanisms
Joseph Bondy-Denomy et al.
ISME JOURNAL (2016)
The Clinical Urine Culture: Enhanced Techniques Improve Detection of Clinically Relevant Microorganisms
Travis K. Price et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2016)
Healthy human gut phageome
Pilar Manrique et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Bacteriophage infections of microbiota can lead to leaky gut in an experimental rodent model
George Tetz et al.
GUT PATHOGENS (2016)
Genome sequences and annotation of two urinary isolates of E. coli
Travis K. Price et al.
STANDARDS IN GENOMIC SCIENCES (2016)
The healthy human microbiome
Jason Lloyd-Price et al.
GENOME MEDICINE (2016)
Revised Estimates for the Number of Human and Bacteria Cells in the Body
Ron Sender et al.
PLOS BIOLOGY (2016)
Does the Urinary Microbiome Play a Role in Urgency Urinary Incontinence and Its Severity?
Lisa Karstens et al.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2016)
More Is Better: Selecting for Broad Host Range Bacteriophages
Alexa Ross et al.
FRONTIERS IN MICROBIOLOGY (2016)
Genomes of Gardnerella Strains Reveal an Abundance of Prophages within the Bladder Microbiome
Kema Malki et al.
PLOS ONE (2016)
Bacteriophages in clinical samples can interfere with microbiological diagnostic tools
Maryury Brown-Jaque et al.
SCIENTIFIC REPORTS (2016)
A diverse virome in kidney transplant patients contains multiple viral subtypes with distinct polymorphisms
Asha Rani et al.
SCIENTIFIC REPORTS (2016)
Seven Bacteriophages Isolated from the Female Urinary Microbiota
Kema Malki et al.
GENOME ANNOUNCEMENTS (2016)
The Bladder Is Not Sterile: History and Current Discoveries on the Urinary Microbiome
Krystal Thomas-White et al.
CURRENT BLADDER DYSFUNCTION REPORTS (2016)
Full-Genome Sequence of Escherichia coli K-15KW01, a Uropathogenic E. coli B2 Sequence Type 127 Isolate Harboring a Chromosomally Carried blaCTX-M-15 Gene
Katrin Zurfluh et al.
GENOME ANNOUNCEMENTS (2016)
Robust high-throughput prokaryote de novo assembly and improvement pipeline for Illumina data
Andrew J. Page et al.
MICROBIAL GENOMICS (2016)
The female urinary microbiome in urgency urinary incontinence
Meghan M. Pearce et al.
AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY (2015)
The isolation and characterization of two Stenotrophomonas maltophilia bacteriophages capable of cross-taxonomic order infectivity
Danielle L. Peters et al.
BMC GENOMICS (2015)
Disease-Specific Alterations in the Enteric Virome in Inflammatory Bowel Disease
Jason M. Norman et al.
CELL (2015)
Relationship of Specific Bacteria in the Cervical and Vaginal Microbiotas With Cervicitis
Linda M. Gorgos et al.
SEXUALLY TRANSMITTED DISEASES (2015)
Bacteriophages isolated from Lake Michigan demonstrate broad host-range across several bacterial phyla
Kema Malki et al.
VIROLOGY JOURNAL (2015)
The human urine virome in association with urinary tract infections
Tasha M. Santiago-Rodriguez et al.
FRONTIERS IN MICROBIOLOGY (2015)
VirSorter: mining viral signal from microbial genomic data
Simon Roux et al.
PEERJ (2015)
Bacteriophage and their potential roles in the human oral cavity
Anna Edlund et al.
JOURNAL OF ORAL MICROBIOLOGY (2015)
Impact of Spontaneous Prophage Induction on the Fitness of Bacterial Populations and Host-Microbe Interactions
Arun M. Nanda et al.
JOURNAL OF BACTERIOLOGY (2015)
Urine Is Not Sterile: Use of Enhanced Urine Culture Techniques To Detect Resident Bacterial Flora in the Adult Female Bladder
Evann E. Hilt et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2014)
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)
Ross Overbeek et al.
NUCLEIC ACIDS RESEARCH (2014)
The Vaginal Microbiota: What Have We Learned after a Decade of Molecular Characterization?
Janneke H. H. M. van de Wijgert et al.
PLOS ONE (2014)
The Female Urinary Microbiome: a Comparison of Women with and without Urgency Urinary Incontinence
Meghan M. Pearce et al.
MBIO (2014)
Bacteria-phage coevolution as a driver of ecological and evolutionary processes in microbial communities
Britt Koskella et al.
FEMS MICROBIOLOGY REVIEWS (2014)
The human polyomavirus BK (BKPyV): virological background and clinical implications
Christine Hanssen Rinaldo et al.
APMIS (2013)
The human JC polyomavirus (JCPyV): virological background and clinical implications
Hans H. Hirsch et al.
APMIS (2013)
BinAligner: a heuristic method to align biological networks
Jialiang Yang et al.
BMC BIOINFORMATICS (2013)
Advances in inflammatory bowel disease pathogenesis: linking host genetics and the microbiome
Dan Knights et al.
GUT (2013)
Spectrum of Bacterial Colonization Associated with Urothelial Cells from Patients with Chronic Lower Urinary Tract Symptoms
Rajvinder Khasriya et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2013)
To kill or not to kill: The balance between lytic and lysogenic viral infection is driven by trophic status
Jerome P. Payet et al.
LIMNOLOGY AND OCEANOGRAPHY (2013)
Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome
Sheetal R. Modi et al.
NATURE (2013)
Study of the Viral and Microbial Communities Associated With Crohn's Disease: A Metagenomic Approach
Vicente Perez-Brocal et al.
CLINICAL AND TRANSLATIONAL GASTROENTEROLOGY (2013)
Regional Variation in Lytic and Lysogenic Viral Infection in the Southern Ocean and Its Contribution to Biogeochemical Cycling
Claire Evans et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Novel Bacterial Taxa in the Human Microbiome
Kristine M. Wylie et al.
PLOS ONE (2012)
Interpreting the epidemiology and natural history of bacterial vaginosis: Are we still confused?
Jeanne M. Marrazzo
ANAEROBE (2011)
Detection and follow-up of torque teno midi virus (small anelloviruses) in nasopharyngeal aspirates and three other human body fluids in children
Zsofia Burian et al.
ARCHIVES OF VIROLOGY (2011)
Scaffolding pre-assembled contigs using SSPACE
Marten Boetzer et al.
BIOINFORMATICS (2011)
The aetiology of bacterial vaginosis
Y. Turovskiy et al.
JOURNAL OF APPLIED MICROBIOLOGY (2011)
Identification of predominant culturable vaginal Lactobacillus species and associated bacteriophages from women with and without vaginal discharge syndrome in South Africa
Leonard H. Damelin et al.
JOURNAL OF MEDICAL MICROBIOLOGY (2011)
Seasonal variations of phage life strategies and bacterial physiological states in three northern temperate lakes
C. F. Maurice et al.
ENVIRONMENTAL MICROBIOLOGY (2010)
FastTree 2-Approximately Maximum-Likelihood Trees for Large Alignments
Morgan N. Price et al.
PLOS ONE (2010)
Inferences and power analysis concerning two negative binomial distributions with an application to MRI lesion counts data
Inmaculada B. Aban et al.
COMPUTATIONAL STATISTICS & DATA ANALYSIS (2009)
PhyloWidget: web-based visualizations for the tree of life
Gregory E. Jordan et al.
BIOINFORMATICS (2008)
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
Daniel R. Zerbino et al.
GENOME RESEARCH (2008)
Inhibition of Neisseria gonorrhoeae epithelial cell interactions by vaginal Lactobacillus species
Rachel R. Spurbeck et al.
INFECTION AND IMMUNITY (2008)
Prophages in marine bacteria: dangerous molecular time bombs or the key to survival in the seas?
John H. Paul
ISME JOURNAL (2008)
RNAmmer:: consistent and rapid annotation of ribosomal RNA genes
Karin Lagesen et al.
NUCLEIC ACIDS RESEARCH (2007)
Condylomata acuminata of the urinary bladder with HPV 11
RZ Karim et al.
PATHOLOGY (2005)
Mauve: Multiple alignment of conserved genomic sequence with rearrangements
ACE Darling et al.
GENOME RESEARCH (2004)
Are viruses driving microbial diversification and diversity?
MG Weinbauer et al.
ENVIRONMENTAL MICROBIOLOGY (2004)
Prophages and bacterial genomics: what have we learned so far?
S Casjens
MOLECULAR MICROBIOLOGY (2003)
Prophage genomics
C Canchaya et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2003)
Bacteriophage control of bacterial virulence
PL Wagner et al.
INFECTION AND IMMUNITY (2002)
Comparative study of vaginal Lactobacillus phages isolated from women in the United States and Turkey: Prevalence, morphology, host range, and DNA homology
AO Kilic et al.
CLINICAL AND DIAGNOSTIC LABORATORY IMMUNOLOGY (2001)
Share Paper
