Related references
Note: Only part of the references are listed.Gut microbial ecology of lizards: insights into diversity in the wild, effects of captivity, variation across gut regions and transmission
Kevin D. Kohl et al.
MOLECULAR ECOLOGY (2017)
Relic DNA is abundant in soil and obscures estimates of soil microbial diversity
Paul Carini et al.
NATURE MICROBIOLOGY (2017)
An Introductory How-to Guide for Incorporating Microbiome Research into Integrative and Comparative Biology
Kevin D. Kohl
INTEGRATIVE AND COMPARATIVE BIOLOGY (2017)
Gut microbiome transmission in lizards
Timothy J. Colston
MOLECULAR ECOLOGY (2017)
Early-life disruption of amphibian microbiota decreases later-life resistance to parasites
Sarah A. Knutie et al.
NATURE COMMUNICATIONS (2017)
Evolutionary Biology Needs Wild Microbiomes
Sarah M. Hird
FRONTIERS IN MICROBIOLOGY (2017)
Like mother like nest: similarity in microbial communities of adult female Pied Flycatchers and their nests
Anne E. Goodenough et al.
JOURNAL OF ORNITHOLOGY (2017)
Microbiome evolution along divergent branches of the vertebrate tree of life: what is known and unknown
Timothy J. Colston et al.
MOLECULAR ECOLOGY (2016)
Nest Bacterial Environment Affects Microbiome of Hoopoe Eggshells, but Not That of the Uropygial Secretion
Angela Martinez-Garcia et al.
PLOS ONE (2016)
Gut Microbiotas and Host Evolution: Scaling Up Symbiosis
Michael Shapira
TRENDS IN ECOLOGY & EVOLUTION (2016)
Microbial Infections Are Associated with Embryo Mortality in Arctic-Nesting Geese
Cristina M. Hansen et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)
Microbiome affects egg carotenoid investment, nestling development and adult oxidative costs of reproduction in Great tits
Staffan Jacob et al.
FUNCTIONAL ECOLOGY (2015)
Preening as a Vehicle for Key Bacteria in Hoopoes
Angela Martinez-Garcia et al.
MICROBIAL ECOLOGY (2015)
Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession
Francisco Dini-Andreote et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Rethinking heritability of the microbiome
Edward J. van Opstal et al.
SCIENCE (2015)
Exploring the avian gut microbiota: current trends and future directions
David W. Waite et al.
FRONTIERS IN MICROBIOLOGY (2015)
Shifts in Bacterial Communities of Eggshells and Antimicrobial Activities in Eggs during Incubation in a Ground-Nesting Passerine
Stephanie Grizard et al.
PLOS ONE (2015)
Predators and predation rates of Skylark Alauda arvensis and Woodlark Lullula arborea nests in a semi-natural area in The Netherlands
Libor Praus et al.
ARDEA (2014)
Interspecific variations in the faecal microbiota of Procellariiform seabirds
Meagan L. Dewar et al.
FEMS MICROBIOLOGY ECOLOGY (2014)
Deciphering microbial landscapes of fish eggs to mitigate emerging diseases
Yiying Liu et al.
ISME JOURNAL (2014)
Host-specificity among abundant and rare taxa in the sponge microbiome
Julie Reveillaud et al.
ISME JOURNAL (2014)
Special structures of hoopoe eggshells enhance the adhesion of symbiont-carrying uropygial secretion that increase hatching success
Manuel Martin-Vivaldi et al.
JOURNAL OF ANIMAL ECOLOGY (2014)
Features governing symbiont persistence in the squid-vibrio association
Eric J. Koch et al.
MOLECULAR ECOLOGY (2014)
The amphibian skin-associated microbiome across species, space and life history stages
Jordan G. Kueneman et al.
MOLECULAR ECOLOGY (2014)
Unravelling the Microbiome of Eggs of the Endangered Sea Turtle Eretmochelys imbricata Identifies Bacteria with Activity against the Emerging Pathogen Fusarium falciforme
Jullie M. Sarmiento-Ramirez et al.
PLOS ONE (2014)
Effect of Incubation on Bacterial Communities of Eggshells in a Temperate Bird, the Eurasian Magpie (Pica pica)
Won Young Lee et al.
PLOS ONE (2014)
Composition of Bacterial Assemblages in Different Components of Reed Warbler Nests and a Possible Role of Egg Incubation in Pathogen Regulation
Hanja B. Brandl et al.
PLOS ONE (2014)
Dynamics of bacterial and fungal communities associated with eggshells during incubation
Stephanie Grizard et al.
ECOLOGY AND EVOLUTION (2014)
Teleost microbiomes: the state of the art in their characterization, manipulation and importance in aquaculture and fisheries
Martin S. Llewellyn et al.
FRONTIERS IN MICROBIOLOGY (2014)
A holobiont birth narrative: the epigenetic transmission of the human microbiome
Scott F. Gilbert
FRONTIERS IN GENETICS (2014)
An experimental test in Mallards (Anas platyrhynchos) of the effect of incubation and maternal preen oil on eggshell microbial load
M. Giraudeau et al.
JOURNAL OF ORNITHOLOGY (2014)
Multiple Symbiont Acquisition Strategies as an Adaptive Mechanism in the Coral Stylophora pistillata
Kristen A. Byler et al.
PLOS ONE (2013)
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
Paul J. McMurdie et al.
PLOS ONE (2013)
Animals in a bacterial world, a new imperative for the life sciences
Margaret McFall-Ngai et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
A general and simple method for obtaining R2 from generalized linear mixed-effects models
Shinichi Nakagawa et al.
METHODS IN ECOLOGY AND EVOLUTION (2013)
Mom Knows Best: The Universality of Maternal Microbial Transmission
Lisa J. Funkhouser et al.
PLOS BIOLOGY (2013)
Avian life history traits influence eggshell bacterial loads: a comparative analysis
Juan Manuel Peralta-Sanchez et al.
IBIS (2012)
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
Daniel McDonald et al.
ISME JOURNAL (2012)
Stochastic and deterministic assembly processes in subsurface microbial communities
James C. Stegen et al.
ISME JOURNAL (2012)
Diversity and function of the avian gut microbiota
Kevin D. Kohl
JOURNAL OF COMPARATIVE PHYSIOLOGY B-BIOCHEMICAL SYSTEMS AND ENVIRONMENTAL PHYSIOLOGY (2012)
EFFECTS OF INCUBATION DELAY ON VIABILITY AND MICROBIAL GROWTH OF WOOD DUCK (AIX SPONSA) EGGS
Johnathan G. Walls et al.
AUK (2011)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
Prevalence of potentially pathogenic culturable bacteria on eggshells and in cloacae of female Pied Flycatchers in a temperate habitat in central Spain
Rafael Ruiz-de-Castaneda et al.
JOURNAL OF FIELD ORNITHOLOGY (2011)
Bayesian community-wide culture-independent microbial source tracking
Dan Knights et al.
NATURE METHODS (2011)
PyNAST: a flexible tool for aligning sequences to a template alignment
J. Gregory Caporaso et al.
BIOINFORMATICS (2010)
Picante: R tools for integrating phylogenies and ecology
Steven W. Kembel et al.
BIOINFORMATICS (2010)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
Microbial and environmental effects on avian egg viability: Do tropical mechanisms act in a temperate environment?
Jennifer M. Wang et al.
ECOLOGY (2010)
Number and colour composition of nest lining feathers predict eggshell bacterial community in barn swallow nests: an experimental study
Juan M. Peralta-Sanchez et al.
FUNCTIONAL ECOLOGY (2010)
Diversity and temporal stability of bacterial communities in a model passerine bird, the zebra finch
Clare McW. H. Benskin et al.
MOLECULAR ECOLOGY (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
A complex journey: transmission of microbial symbionts
Monika Bright et al.
NATURE REVIEWS MICROBIOLOGY (2010)
Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns
Maria G. Dominguez-Bello et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
Morgan N. Price et al.
MOLECULAR BIOLOGY AND EVOLUTION (2009)
Aromatic plants in nests of the blue tit Cyanistes caeruleus protect chicks from bacteria
Adele Mennerat et al.
OECOLOGIA (2009)
Avian Incubation Inhibits Growth and Diversification of Bacterial Assemblages on Eggs
Matthew D. Shawkey et al.
PLOS ONE (2009)
Simultaneous inference in general parametric models
Torsten Hothorn et al.
BIOMETRICAL JOURNAL (2008)
Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques
Rudolf Amann et al.
NATURE REVIEWS MICROBIOLOGY (2008)
Worlds within worlds: evolution of the vertebrate gut microbiota
Ruth E. Ley et al.
NATURE REVIEWS MICROBIOLOGY (2008)
The effects of exposure and microbes on hatchability of eggs in open-cup and cavity nests
Renee D. Godard et al.
JOURNAL OF AVIAN BIOLOGY (2007)
Incubation reduces microbial growth on eggshells and the opportunity for trans-shell infection
MI Cook et al.
ECOLOGY LETTERS (2005)
Microbial infection affects egg viability and incubation behavior in a tropical passerine
MI Cook et al.
BEHAVIORAL ECOLOGY (2005)
Trans-shell infection by pathogenic micro-organisms reduces the shelf life of non-incubated bird's eggs: a constraint on the onset of incubation?
MI Cook et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2003)