4.5 Article

Toward better benchmarking: challenge-based methods assessment in cancer genomics

Journal

GENOME BIOLOGY
Volume 15, Issue 9, Pages -

Publisher

BMC
DOI: 10.1186/s13059-014-0462-7

Keywords

-

Funding

  1. Ontario Institute for Cancer Research through Government of Ontario
  2. Prostate Cancer Canada
  3. Movember Foundation [RS2014-01]
  4. Terry Fox Research Institute New Investigator Award
  5. CIHR New Investigator Award
  6. Genome Canada through a Large-Scale Applied Project contract
  7. Discovery Frontiers: Advancing Big Data Science in Genomics Research program
  8. Natural Sciences and Engineering Research Council (NSERC) of Canada
  9. Canadian Institutes of Health Research (CIHR)
  10. Genome Canada
  11. Canada Foundation for Innovation (CFI)
  12. NIH [R01 CA180778, U24-CA143858]

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Rapid technological development has created an urgent need for improved evaluation of algorithms for the analysis of cancer genomics data. We outline how challenge-based assessment may help fill this gap by leveraging crowd-sourcing to distribute effort and reduce bias.

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