4.4 Article

Molecular evolution and expression of oxygen transport genes in livebearing fishes (Poeciliidae) from hydrogen sulfide rich springs

Journal

GENOME
Volume 61, Issue 4, Pages 273-286

Publisher

CANADIAN SCIENCE PUBLISHING
DOI: 10.1139/gen-2017-0051

Keywords

adaptation; convergent evolution; hemoglobin; molecular evolution; myoglobin; sulfide springs

Funding

  1. National Science Foundation [IOS-1463720, IOS-1557795, IOS-1557860]
  2. Army Research Office [W911NF-15-1-0175]
  3. Defense University Research Instrumentation Program of the U.S. Office of Naval Research [W911NF-16-1-0225]
  4. Graduate Assistance in Areas of National Need (GAANN) Fellowship
  5. NSF Graduate Research Fellowship (GRFP)
  6. University of Minnesota Grand Challenges Postdoctoral Program

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Hydrogen sulfide (H2S) is a natural toxicant in some aquatic environments that has diverse molecular targets. It binds to oxygen transport proteins, rendering them non-functional by reducing oxygen-binding affinity. Hence, organisms permanently inhabiting H2S-rich environments are predicted to exhibit adaptive modifications to compensate for the reduced capacity to transport oxygen. We investigated 10 lineages of fish of the family Poeciliidae that have colonized freshwater springs rich in H2S-along with related lineages from non-sulfidic environments-to test hypotheses about the expression and evolution of oxygen transport genes in a phylogenetic context. We predicted shifts in the expression of and signatures of positive selection on oxygen transport genes upon colonization of H2S-rich habitats. Our analyses indicated significant shifts in gene expression for multiple hemoglobin genes in lineages that have colonized H2S-rich environments, and three hemoglobin genes exhibited relaxed selection in sulfidic compared to non-sulfidic lineages. However, neither changes in gene expression nor signatures of selection were consistent among alllineages in H2S-rich environments. Oxygen transport genes may consequently be predictable targets of selection during adaptation to sulfidic environments, but changes in gene expression and molecular evolution of oxygen transport genes in H2S-rich environments are not necessarily repeatable across replicated lineages.

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