Related references
Note: Only part of the references are listed.Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
Jongsik Chun et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2018)
Gifted microbes for genome mining and natural product discovery
Richard H. Baltz
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY (2017)
Database Resources of the National Center for Biotechnology
Richa Agarwala et al.
NUCLEIC ACIDS RESEARCH (2017)
Macrotermycins A-D, Glycosylated Macrolactams from a Termite-Associated Amycolatopsis sp M39
Christine Beemelmanns et al.
ORGANIC LETTERS (2017)
Antibiotic-producing symbionts dynamically transition between plant pathogenicity and insect-defensive mutualism
Laura V. Florez et al.
NATURE COMMUNICATIONS (2017)
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison
Michael Richter et al.
BIOINFORMATICS (2016)
Progress in Understanding the Genetic Information and Biosynthetic Pathways behind Amycolatopsis Antibiotics, with Implications for the Continued Discovery of Novel Drugs
Su Chen et al.
CHEMBIOCHEM (2016)
The Pfam protein families database: towards a more sustainable future
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2016)
Amycolatopsis xuchangensis sp nov and Amycolatopsis jiguanensis sp nov., isolated from soil
Jian-Rong Huang et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2016)
Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes
Daniel Wibberg et al.
BMC GENOMICS (2016)
Every Gene Is Everywhere but the Environment Selects: Global Geolocalization of Gene Sharing in Environmental Samples through Network Analysis
Marco Fondi et al.
GENOME BIOLOGY AND EVOLUTION (2016)
Natural product discovery: past, present, and future
Leonard Katz et al.
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY (2016)
Natural Products as Sources of New Drugs from 1981 to 2014
David J. Newman et al.
JOURNAL OF NATURAL PRODUCTS (2016)
Sequencing rare marine actinomycete genomes reveals high density of unique natural product biosynthetic gene clusters
Michelle A. Schorn et al.
MICROBIOLOGY-SGM (2016)
The evolution of genome mining in microbes - a review
Nadine Ziemert et al.
NATURAL PRODUCT REPORTS (2016)
Natural Products and the Gene Cluster Revolution
Paul R. Jensen
TRENDS IN MICROBIOLOGY (2016)
BPGA- an ultra-fast pan-genome analysis pipeline
Narendrakumar M. Chaudhari et al.
SCIENTIFIC REPORTS (2016)
A systematic study of the whole genome sequence of Amycolatopsis methanolica strain 239T provides an insight into its physiological and taxonomic properties which correlate with its position in the genus
Biao Tang et al.
SYNTHETIC AND SYSTEMS BIOTECHNOLOGY (2016)
Comparative Genomics Reveals the Core and Accessory Genomes of Streptomyces Species
Ji-Nu Kim et al.
JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY (2015)
Natural products in soil microbe interactions and evolution
Matthew F. Traxler et al.
NATURAL PRODUCT REPORTS (2015)
Computational approaches to natural product discovery
Marnix H. Medema et al.
NATURE CHEMICAL BIOLOGY (2015)
The structural biology of biosynthetic megaenzymes
Kira J. Weissman
NATURE CHEMICAL BIOLOGY (2015)
antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters
Tilmann Weber et al.
NUCLEIC ACIDS RESEARCH (2015)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
Complete genome sequence and comparative genomic analyses of the vancomycin-producing Amycolatopsis orientalis
Li Xu et al.
BMC GENOMICS (2014)
Insights into Secondary Metabolism from a Global Analysis of Prokaryotic Biosynthetic Gene Clusters
Peter Cimermancic et al.
CELL (2014)
EstimateS turns 20: statistical estimation of species richness and shared species from samples, with non-parametric extrapolation
Robert K. Colwell et al.
ECOGRAPHY (2014)
A Proposed Genus Boundary for the Prokaryotes Based on Genomic Insights
Qi-Long Qin et al.
JOURNAL OF BACTERIOLOGY (2014)
Whole-genome sequence comparison as a method for improving bacterial species definition
Wen Zhang et al.
JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY (2014)
A roadmap for natural product discovery based on large-scale genomics and metabolomics
James R. Doroghazi et al.
NATURE CHEMICAL BIOLOGY (2014)
Diversity and evolution of secondary metabolism in the marine actinomycete genus Salinispora
Nadine Ziemert et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes
Todd J. Treangen et al.
GENOME BIOLOGY (2014)
Comparative genomics of actinomycetes with a focus on natural product biosynthetic genes
James R. Doroghazi et al.
BMC GENOMICS (2013)
Specialized microbial metabolites: functions and origins
Julian Davies
JOURNAL OF ANTIBIOTICS (2013)
Detecting Sequence Homology at the Gene Cluster Level with MultiGeneBlast
Marnix H. Medema et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
Koichiro Tamura et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature
Paul G. Arnison et al.
NATURAL PRODUCT REPORTS (2013)
Identification of the chelocardin biosynthetic gene cluster from Amycolatopsis sulphurea: a platform for producing novel tetracycline antibiotics
Tadeja Lukezic et al.
MICROBIOLOGY-SGM (2013)
Comparative Genomic Analysis of the Genus Nocardiopsis Provides New Insights into Its Genetic Mechanisms of Environmental Adaptability
Hong-Wei Li et al.
PLOS ONE (2013)
Genome Sequences of Amycolatopsis orientalis subsp. orientalis Strains DSM 43388 and DSM 46075
Haeyoung Jeong et al.
GENOME ANNOUNCEMENTS (2013)
PGAP: pan-genomes analysis pipeline
Yongbing Zhao et al.
BIOINFORMATICS (2012)
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
Matthew Kearse et al.
BIOINFORMATICS (2012)
Quartromicin Biosynthesis: Two Alternative Polyketide Chains Produced by One Polyketide Synthase Assembly Line
Hai-Yan He et al.
CHEMISTRY & BIOLOGY (2012)
IMG: the integrated microbial genomes database and comparative analysis system
Victor M. Markowitz et al.
NUCLEIC ACIDS RESEARCH (2012)
The Natural Product Domain Seeker NaPDoS: A Phylogeny Based Bioinformatic Tool to Classify Secondary Metabolite Gene Diversity
Nadine Ziemert et al.
PLOS ONE (2012)
Dendroscope 3: An Interactive Tool for Rooted Phylogenetic Trees and Networks
Daniel H. Huson et al.
SYSTEMATIC BIOLOGY (2012)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism
Wei Zhao et al.
CELL RESEARCH (2010)
Amycolatopsis halophila sp nov., a halophilic actinomycete isolated from a salt lake
Shu-Kun Tang et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Genes and enzymes involved in bacterial isoprenoid biosynthesis
Martina Daum et al.
CURRENT OPINION IN CHEMICAL BIOLOGY (2009)
Amycolatopsis marina sp nov., an actinomycete isolated from an ocean sediment
Jiang Bian et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria
Kevin Penn et al.
ISME JOURNAL (2009)
Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database
Tim Carver et al.
BIOINFORMATICS (2008)
FaBox: an online toolbox for FASTA sequences
P. Villesen
MOLECULAR ECOLOGY NOTES (2007)
Amycolatopsis saalfeldensis sp nov., a novel actinomycete isolated from a medieval alum slate mine
Marc Rene Carlsohn et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Species-specific secondary metabolite production in marine actinomycetes of the genus Salinispora
Paul R. Jensen et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
DNA-DNA hybridization values and their relationship to whole-genome sequence similarities
Johan Goris et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Evolution of the terminal regions of the streptomyces linear chromosome
Frederic Choulet et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
Exploration of Amycolatopsis diversity in soil using genus-specific primers and novel selective media
Geok Yuan Annie Tan et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2006)
An initial strategy for comparing proteins at the domain architecture level
Kui Lin et al.
BIOINFORMATICS (2006)
Reclassification of Amycolatopsis orientalis DSM 43387 as Amycolatopsis benzoatilytica sp nov.
S Majumdar et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2006)
Amycolatopsis palatopharyngis sp nov., a potentially pathogenic actinomycete isolated from a human clinical source
Y Huang et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2004)
Amycolatopsis kentuckyensis sp nov., Amycolatopsis lexingtonensis sp nov and Amycolatopsis pretoriensis sp nov., isolated from equine placentas
DP Labeda et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2003)
Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis
H Ikeda et al.
NATURE BIOTECHNOLOGY (2003)
Three new antibiotic producing species of the genus Amycolatopsis, Amycolatopsis balhimycina sp nov., A-tolypomycina sp nov., A-vancoresmycina sp nov., and description of Amycolatopsis keratiniphila subsp keratiniphila subsp nov and A-keratiniphila subsp nogabecina subsp nov.
JM Wink et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2003)
Kigamicins, novel antitumor antibiotics - I. Taxonomy, isolation, physico-chemical properties and biological activities
S Kunimoto et al.
JOURNAL OF ANTIBIOTICS (2003)
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)
SD Bentley et al.
NATURE (2002)
Share Paper
