Related references
Note: Only part of the references are listed.Universal target-enrichment baits for anthozoan (Cnidaria) phylogenomics: New approaches to long-standing problems
Andrea M. Quattrini et al.
MOLECULAR ECOLOGY RESOURCES (2018)
PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses
Robert Lanfear et al.
MOLECULAR BIOLOGY AND EVOLUTION (2017)
Monophyly of Anthozoa (Cnidaria): why do nuclear and mitochondrial phylogenies disagree?
Marine Pratlong et al.
ZOOLOGICA SCRIPTA (2017)
Three Cambrian fossils assembled into an extinct body plan of cnidarian affinity
Qiang Ou et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
Contentious relationships in phylogenomic studies can be driven by a handful of genes
Xing-Xing Shen et al.
NATURE ECOLOGY & EVOLUTION (2017)
A Large and Consistent Phylogenomic Dataset Supports Sponges as the Sister Group to All Other Animals
Paul Simion et al.
CURRENT BIOLOGY (2017)
Phylogenomic analysis of Copepoda (Arthropoda, Crustacea) reveals unexpected similarities with earlier proposed morphological phylogenies
Seong-il Eyun
BMC EVOLUTIONARY BIOLOGY (2017)
Succession of generations is still the general paradigm for scyphozoan life cycles
Andre C. Morandini et al.
BULLETIN OF MARINE SCIENCE (2016)
The Transcriptome of the Zoanthid Protopalythoa variabilis (Cnidaria, Anthozoa) Predicts a Basal Repertoire of Toxin-like and Venom-Auxiliary Polypeptides
Chen Huang et al.
GENOME BIOLOGY AND EVOLUTION (2016)
Systematics of stalked jellyfishes (Cnidaria: Staurozoa)
Lucilia S. Miranda et al.
PEERJ (2016)
Comparative internal anatomy of Staurozoa (Cnidaria), with functional and evolutionary inferences
Lucilia S. Miranda et al.
PEERJ (2016)
Evaluation of BLAST-based edge-weighting metrics used for homology inference with the Markov Clustering algorithm
Theodore R. Gibbons et al.
BMC BIOINFORMATICS (2015)
Extracting phylogenetic signal and accounting for bias in whole-genome data sets supports the Ctenophora as sister to remaining Metazoa
Marek L. Borowiec et al.
BMC GENOMICS (2015)
THE ROAD TO CNIDARIA: HISTORY OF PHYLOGENY OF THE MYXOZOA
Jonathan Foox et al.
JOURNAL OF PARASITOLOGY (2015)
Drifting in the oceans: Isarachnanthus nocturnus (Cnidaria, Ceriantharia, Arachnactidae), an anthozoan with an extended planktonic stage
Sergio N. Stampar et al.
MARINE BIOLOGY (2015)
Genomic insights into the evolutionary origin of Myxozoa within Cnidaria
E. Sally Chang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Phylogenomic Analyses Support Traditional Relationships within Cnidaria
Felipe Zapata et al.
PLOS ONE (2015)
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
David M. Emms et al.
GENOME BIOLOGY (2015)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
InterProScan 5: genome-scale protein function classification
Philip Jones et al.
BIOINFORMATICS (2014)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads
Rei Kajitani et al.
GENOME RESEARCH (2014)
Fast-Evolving Mitochondrial DNA in Ceriantharia: A Reflection of Hexacorallia Paraphyly?
Sergio N. Stampar et al.
PLOS ONE (2014)
Hidden among Sea Anemones: The First Comprehensive Phylogenetic Reconstruction of the Order Actiniaria (Cnidaria, Anthozoa, Hexacorallia) Reveals a Novel Group of Hexacorals
Estefania Rodriguez et al.
PLOS ONE (2014)
Predictable transcriptome evolution in the convergent and complex bioluminescent organs of squid
M. Sabrina Pankey et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
The engine of the reef: photobiology of the coral-algal symbiosis
Melissa S. Roth
FRONTIERS IN MICROBIOLOGY (2014)
Agalma: an automated phylogenomics workflow
Casey W. Dunn et al.
BMC BIOINFORMATICS (2013)
Cnidarian phylogenetic relationships as revealed by mitogenomics
Ehsan Kayal et al.
BMC EVOLUTIONARY BIOLOGY (2013)
PhyloTreePruner: A Phylogenetic Tree-Based Approach for Selection of Orthologous Sequences for Phylogenomics
Kevin M. Kocot et al.
EVOLUTIONARY BIOINFORMATICS (2013)
Internal Anatomy of Haliclystus antarcticus (Cnidaria, Staurozoa) with a Discussion on Histological Features Used in Staurozoan Taxonomy
Lucilia S. Miranda et al.
JOURNAL OF MORPHOLOGY (2013)
Insights into bilaterian evolution from three spiralian genomes
Oleg Simakov et al.
NATURE (2013)
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
Brian J. Haas et al.
NATURE PROTOCOLS (2013)
Identifying Hidden Rate Changes in the Evolution of a Binary Morphological Character: The Evolution of Plant Habit in Campanulid Angiosperms
Jeremy M. Beaulieu et al.
SYSTEMATIC BIOLOGY (2013)
PhyloBayes MPI: Phylogenetic Reconstruction with Infinite Mixtures of Profiles in a Parallel Environment
Nicolas Lartillot et al.
SYSTEMATIC BIOLOGY (2013)
Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record
Eunji Park et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2012)
phytools: an R package for phylogenetic comparative biology (and other things)
Liam J. Revell
METHODS IN ECOLOGY AND EVOLUTION (2012)
Development and myogenesis of the vermiform Buddenbrockia (Myxozoa) and implications for cnidarian body plan evolution
Alexander Gruhl et al.
EVODEVO (2012)
The ancient evolutionary origins of Scleractinia revealed by azooxanthellate corals
Jaroslaw Stolarski et al.
BMC EVOLUTIONARY BIOLOGY (2011)
REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms
Fran Supek et al.
PLOS ONE (2011)
Molecular Phylogenetic Insights into the Evolution of Octocorallia: A Review
Catherine S. McFadden et al.
INTEGRATIVE AND COMPARATIVE BIOLOGY (2010)
Character Evolution in Hydrozoa (phylum Cnidaria)
Paulyn Cartwright et al.
INTEGRATIVE AND COMPARATIVE BIOLOGY (2010)
On the origin and evolution of the lower Metazoa
Luitfried V. Salvini-Plawen
JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH (2010)
Repeated loss of coloniality and symbiosis in scleractinian corals
Marcos S. Barbeitos et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic supergroups
Vladimir Hampl et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Molecular Phylogenetics of Thecata (Hydrozoa, Cnidaria) Reveals Long-Term Maintenance of Life History Traits despite High Frequency of Recent Character Changes
Lucas Leclere et al.
SYSTEMATIC BIOLOGY (2009)
Phyutility: a phyloinformatics tool for trees, alignments and molecular data
Stephen A. Smith et al.
BIOINFORMATICS (2008)
Using native and syntenically mapped cDNA alignments to improve de novo gene finding
Mario Stanke et al.
BIOINFORMATICS (2008)
Phylogenetic placement of the enigmatic parasite, Polypodium hydriforme, within the Phylum Cnidaria
Nathaniel M. Evans et al.
BMC EVOLUTIONARY BIOLOGY (2008)
Phylogenetics of Trachylina (Cnidaria: Hydrozoa) with new insights on the evolution of some problematical taxa
Allen G. Collins et al.
JOURNAL OF THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM (2008)
Phylogenetics of Hydroidolina (Hydrozoa: Cnidaria)
Paulyn Cartwright et al.
JOURNAL OF THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM (2008)
Broad phylogenomic sampling improves resolution of the animal tree of life
Casey W. Dunn et al.
NATURE (2008)
Origin and evolution of a myxozoan worm
Eva Jimenez-Guri et al.
INTEGRATIVE AND COMPARATIVE BIOLOGY (2007)
Exceptionally Preserved Jellyfishes from the Middle Cambrian
Paulyn Cartwright et al.
PLOS ONE (2007)
Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization
Nicholas H. Putnam et al.
SCIENCE (2007)
The deepest divergences in land plants inferred from phylogenomic evidence
Yin-Long Qiu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
SIMMAP: Stochastic character mapping of discrete traits on phylogenies
JP Bollback
BMC BIOINFORMATICS (2006)
Medusozoan phylogeny and character evolution clarified by new large and small subunit rDNA data and an assessment of the utility of phylogenetic mixture models
AG Collins et al.
SYSTEMATIC BIOLOGY (2006)
Origins of bilateral symmetry:: Hox and dpp expression in a sea anemone
JR Finnerty et al.
SCIENCE (2004)
Systematics of the Hexacorallia (Cnidaria: Anthozoa)
M Daly et al.
ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY (2003)
OrthoMCL: Identification of ortholog groups for eukaryotic genomes
L Li et al.
GENOME RESEARCH (2003)
Phylogeny of Medusozoa and the evolution of cnidarian life cycles
AG Collins
JOURNAL OF EVOLUTIONARY BIOLOGY (2002)
Share Paper
