4.7 Article

Discovery of polar spirocyclic orally bioavailable urea inhibitors of soluble epoxide hydrolase

Journal

BIOORGANIC CHEMISTRY
Volume 80, Issue -, Pages 655-667

Publisher

ACADEMIC PRESS INC ELSEVIER SCIENCE
DOI: 10.1016/j.bioorg.2018.07.014

Keywords

Prins reaction; Spirocyclic; 1-Oxa-9-azaspiro[5.5]undecan-4-amine; Orthogonal periphery group variation; Oral bioavailability; Low LogD; Phosphate buffer solubility; Eutomer; Distomer; Protein-ligand crystal structure

Funding

  1. Russian Scientific Fund [14-50-00069]
  2. Deutsche Forschungsgemeinschaft (DFG) [Heisenberg-Professur PR 1405/4-1, Sachbeihilfe PR 1405/2-2, Sonderforschungsbereich SBB 1039]
  3. program Landes-Offensive zur Entwicklung Wissenschaftlich-okonomischer Exzellenz (LOEWE) of the State of Hessen, Research Center for Translational Medicine and Pharmacology TMP
  4. Academy of Finland [308329/JR]
  5. Russian Science Foundation [14-50-00069] Funding Source: Russian Science Foundation

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Spirocyclic 1-oxa-9-azaspiro[5.5]undecan-4-amine scaffold was explored as a basis for the design of potential inhibitors of soluble epoxide hydrolase (sEH). Synthesis and testing of the initial SAR-probing library followed by biochemical testing against sEH allowed nominating a racemic lead compound ( +/- )-22. The latter showed remarkable ( > 0.5 mM) solubility in aqueous phosphate buffer solution, unusually low (for sEH inhibitors) lipophilicity as confirmed by experimentally determined logD(7.4) of 0.99, and an excellent oral bioavailability in mice (as well as other pharmacokinetic characteristics). Individual enantiomer profiling revealed that the inhibitory potency primarily resided with the dextrorotatory eutomer ( + )-22 (IC50 4.99 +/- 0.18 nM). For the latter, a crystal structure of its complex with a C-terminal domain of sEH was obtained and resolved. These data fully validate (+)-22 as a new non-racemic advanced lead compound for further development as a potential therapeutic agent for use in such areas as cardiovascular disease, inflammation and pain.

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