Journal
BIOINFORMATICS
Volume 34, Issue 19, Pages 3377-3379Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/bty336
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Funding
- National Agency of Research and Innovation (ANII)
- Program for the Development of Basic Sciences (PEDECIBA)
- Basque Department of Industry, Tourism and Trade (Etortek Program)
- Basque Department of Industry, Tourism and Trade (Elkartek Program)
- Innovation Technology Department of Bizkaia County
- CIBERehd Network
- Spanish MINECO [BFU2014-52282-P, BFU2017-84653-P]
- Severo Ochoa Excellence Accreditation [SEV-2016-0644]
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Genes sharing functions, expression patterns or quantitative traits are not randomly distributed along eukaryotic genomes. In order to study the distribution of genes that share a given feature, we present Cluster Locator, an online analysis and visualization tool. Cluster Locator determines the number, size and position of all the clusters formed by the protein-coding genes on a list according to a given maximum gap, the percentage of gene clustering of the list and its statistical significance. The output includes a visual representation of the distribution of genes and gene clusters along the reference genome. Availability and implementation: Cluster Locator is freely available at http://clusterlocator.bnd.edu.uy/.
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