4.7 Article

Development of mRNA-based body fluid identification using reverse transcription loop-mediated isothermal amplification

Journal

ANALYTICAL AND BIOANALYTICAL CHEMISTRY
Volume 410, Issue 18, Pages 4371-4378

Publisher

SPRINGER HEIDELBERG
DOI: 10.1007/s00216-018-1088-5

Keywords

Body fluid identification; mRNA; RT-LAMP; Hemoglobin beta; Transglutaminase 4; Statherin

Funding

  1. Japan Society for the Promotion of Science (JSPS) KAKENHI [JP26933005, JP15H00672]

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Identifying body fluids from forensic samples can provide valuable evidence for criminal investigations. Messenger RNA (mRNA)-based body fluid identification was recently developed, and highly sensitive parallel identification using reverse transcription polymerase chain reaction (RT-PCR) has been described. In this study, we developed reverse transcription loop-mediated isothermal amplification (RT-LAMP) as a simple, rapid assay for identifying three common forensic body fluids, namely blood, semen, and saliva, and evaluated its specificity and sensitivity. Hemoglobin beta (HBB), transglutaminase 4 (TGM4), and statherin (STATH) were selected as marker genes for blood, semen, and saliva, respectively. RT-LAMP could be performed in a single step including both reverse transcription and DNA amplification under an isothermal condition within 60 min, and detection could be conveniently performed via visual fluorescence. Marker-specific amplification was performed in each assay, and no cross-reaction was observed among five representative forensically relevant body fluids. The detection limits of the assays were 0.3 nL, 30 nL, and 0.3 mu L for blood, semen, and saliva, respectively, and their sensitivities were comparable with those of RT-PCR. Furthermore, RT-LAMP assays were applicable to forensic casework samples. It is considered that RT-LAMP is useful for body fluid identification.

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