Journal
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY
Volume 73, Issue -, Pages 469-477Publisher
INT UNION CRYSTALLOGRAPHY
DOI: 10.1107/S2059798317007859
Keywords
Collaborative Computational Project for Electron cryo-Microscopy; CCP-EM; cryo-EM
Funding
- Medical Research Council [MR/J000825/1, MR/N009614/1]
- Biotechnology and Biological Sciences Research Council [BB/P000975/1] Funding Source: researchfish
- Medical Research Council [MR/N009614/1, MR/J000825/1] Funding Source: researchfish
- BBSRC [BB/P000975/1] Funding Source: UKRI
- MRC [MR/N009614/1, MR/J000825/1] Funding Source: UKRI
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As part of its remit to provide computational support to the cryo-EM community, the Collaborative Computational Project for Electron cryo-Microscopy (CCP-EM) has produced a software framework which enables easy access to a range of programs and utilities. The resulting software suite incorporates contributions from different collaborators by encapsulating them in Python task wrappers, which are then made accessible via a user-friendly graphical user interface as well as a command-line interface suitable for scripting. The framework includes tools for project and data management. An overview of the design of the framework is given, together with a survey of the functionality at different levels. The current CCP-EM suite has particular strength in the building and refinement of atomic models into cryo-EM reconstructions, which is described in detail.
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