4.0 Article

Unexpected beauty and diversity in the structures of three homologous 4,5-dialkoxy-1-ethynyl-2-nitrobenzenes: the subtle interplay between intermolecular C-H ... O hydrogen bonds and alkyl chain length

Journal

Publisher

INT UNION CRYSTALLOGRAPHY
DOI: 10.1107/S2053229617012761

Keywords

hydrogen bonding; crystal structure; SQUEEZE; hydrogen-bonded hexamers; hydrogen-bonded dimers; self-complementary hydrogen bonds

Funding

  1. Missouri State University
  2. Missouri State University Provost Incentive Fund

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The synthesis, H-1 and C-13 NMR spectra, and X-ray structures are described for three dialkoxy ethynylnitrobenzenes that differ only in the length of the alkoxy chain, namely 1-ethynyl-2-nitro-4,5-dipropoxybenzene, C14H17NO4, 1,2-dibutoxy- 4-ethynyl-5-nitrobenzene, C16H21NO4, and 1-ethynyl-2-nitro-4,5-dipentoxybenzene, C18H25NO4. Despite the subtle changes in molecular structure, the crystal structures of the three compounds display great diversity. Thus, 1-ethynyl-2-nitro-4,5-dipropoxybenzene crystallizes in the trigonal crystal system in the space group R (3) over bar, with Z = 18, 1,2-dibutoxy-4-ethynyl-5-nitrobenzene crystallizes in the monoclinic crystal system in the space group P2(1)/c, with Z = 4, and 1-ethynyl-2-nitro-4,5-dipentoxybenzene crystallizes in the triclinic crystal system in the space group P (1) over bar, with Z = 2. The crystal structure of 1-ethynyl-2-nitro-4,5-dipropoxybenzene is dominated by planar hexamers formed by a bifurcated alkoxy sp-C-H center dot center dot center dot O, O' interaction, while the structure of the dibutoxy analogue is dominated by planar ribbons of molecules linked by a similar bifurcated alkoxy sp-C-H center dot center dot center dot O, O' interaction. In contrast, the dipentoxy analogue forms ribbons of molecules alternately connected by a self-complementary sp-C-H center dot center dot center dot O2N interaction and a self-complementary sp(2)- C- H center dot center dot center dot O2N interaction. Disordered solvent was included in the crystals of 1-ethynyl-2-nitro-4,5-dipropoxybenzene and its contribution was removed during refinement.

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