Related references
Note: Only part of the references are listed.Inheritance of Virulence, Construction of a Linkage Map, and Mapping Dominant Virulence Genes in Puccinia striiformis f. sp tritici Through Characterization of a Sexual Population with Genotyping-by-Sequencing
Congying Yuan et al.
PHYTOPATHOLOGY (2018)
Comparative Analysis Highlights Variable Genome Content of Wheat Rusts and Divergence of the Mating Loci
Christina A. Cuomo et al.
G3-GENES GENOMES GENETICS (2017)
Effectors from Wheat Rust Fungi Suppress Multiple Plant Defense Responses
Sowmya R. Ramachandran et al.
PHYTOPATHOLOGY (2017)
Virulence Characterization of Wheat Stripe Rust Fungus Puccinia striiformis f. sp tritici in Ethiopia and Evaluation of Ethiopian Wheat Germplasm for Resistance to Races of the Pathogen from Ethiopia and the United States
Anmin Wan et al.
PLANT DISEASE (2017)
Changes of Races and Virulence Genes in Puccinia striiformis f. sp tritici, the Wheat Stripe Rust Pathogen, in the United States from 1968 to 2009
Tinglan Liu et al.
PLANT DISEASE (2017)
Dissection of genomic features and variations of three pathotypes of Puccinia striiformis through whole genome sequencing
Kanti Kiran et al.
SCIENTIFIC REPORTS (2017)
Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data
Konstantin Okonechnikov et al.
BIOINFORMATICS (2016)
EffectorP: predicting fungal effector proteins from secretomes using machine learning
Jana Sperschneider et al.
NEW PHYTOLOGIST (2016)
Replacement of the European wheat yellow rust population by new races from the centre of diversity in the near-Himalayan region
M. S. Hovmoller et al.
PLANT PATHOLOGY (2016)
Role of Alternate Hosts in Epidemiology and Pathogen Variation of Cereal Rusts
Jie Zhao et al.
ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 54 (2016)
Plant-Pathogen Effectors: Cellular Probes Interfering with Plant Defenses in Spatial and Temporal Manners
Tania Y. Toruno et al.
ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 54 (2016)
Cladosporium fulvum Effectors: Weapons in the Arms Race with Tomato
Pierre J. G. M. de Wit
ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 54 (2016)
Secreted protein gene derived-single nucleotide polymorphisms (SP-SNPs) reveal population diversity and differentiation of Puccinia striiformis f. sp tritici in the United States
Chongjing Xia et al.
FUNGAL BIOLOGY (2016)
The stripe rust fungal effector PEC6 suppresses pattern-triggered immunity in a host species-independent manner and interacts with adenosine kinases
Changhai Liu et al.
NEW PHYTOLOGIST (2016)
Virulence and Simple Sequence Repeat Marker Segregation in a Puccinia striiformis f. sp tritici Population Produced by Selfing a Chinese Isolate on Berberis shensiana
Yuan Tian et al.
PHYTOPATHOLOGY (2016)
Grass Hosts Harbor More Diverse Isolates of Puccinia striiformis Than Cereal Crops
P. Cheng et al.
PHYTOPATHOLOGY (2016)
Molecular Mapping of Stripe Rust Resistance Gene Yr76 in Winter Club Wheat Cultivar Tyee
C. Xiang et al.
PHYTOPATHOLOGY (2016)
Races of Puccinia striiformis f. sp tritici in the United States in 2011 and 2012 and Comparison with Races in 2010
Armin Wan et al.
PLANT DISEASE (2016)
Kingdom-Wide Analysis of Fungal Small Secreted Proteins (SSPs) Reveals their Potential Role in Host Association
Ki-Tae Kim et al.
Frontiers in Plant Science (2016)
Avirulence Genes in Cereal Powdery Mildews: The Gene-for-Gene Hypothesis 2.0
Salim Bourras et al.
FRONTIERS IN PLANT SCIENCE (2016)
Form and function of fungal and oomycete effectors
William C. Sharpee et al.
FUNGAL BIOLOGY REVIEWS (2016)
Identification of promising host-induced silencing targets among genes preferentially transcribed in haustoria of Puccinia
Chuntao Yin et al.
BMC GENOMICS (2015)
Characterization of protein kinase PsSRPKL, a novel pathogenicity factor in the wheat stripe rust fungus
Yulin Cheng et al.
ENVIRONMENTAL MICROBIOLOGY (2015)
Analysis of cytochrome b5 reductase-mediated metabolism in the phytopathogenic fungus Zymoseptoria tritici reveals novel functionalities implicated in virulence
Mark C. Derbyshire et al.
FUNGAL GENETICS AND BIOLOGY (2015)
Genome-Wide Analysis in Three Fusarium Pathogens Identifies Rapidly Evolving Chromosomes and Genes Associated with Pathogenicity
Jana Sperschneider et al.
GENOME BIOLOGY AND EVOLUTION (2015)
HMMER web server: 2015 update
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2015)
A Phytophthora sojae Glycoside Hydrolase 12 Protein Is a Major Virulence Factor during Soybean Infection and Is Recognized as a PAMP
Zhenchuan Ma et al.
PLANT CELL (2015)
Barberry as Alternate Host Is Important for Puccinia graminis f. sp tritici But Not for Puccinia striiformis f. sp tritici in the US Pacific Northwest
M. N. Wang et al.
PLANT DISEASE (2015)
Advances and Challenges in Computational Prediction of Effectors from Plant Pathogenic Fungi
Jana Sperschneider et al.
PLOS PATHOGENS (2015)
The Pathogen-Host Interactions database (PHI-base): additions and future developments
Martin Urban et al.
NUCLEIC ACIDS RESEARCH (2015)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
Compositions of fungal secretomes indicate a greater impact of phylogenetic history than lifestyle adaptation
Jorrit-Jan Krijger et al.
BMC GENOMICS (2014)
UpSet: Visualization of Intersecting Sets
Alexander Lex et al.
IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS (2014)
Potential oversummering and overwintering regions for the wheat stripe rust pathogen in the contiguous United States
Dipak Sharma-Poudyal et al.
INTERNATIONAL JOURNAL OF BIOMETEOROLOGY (2014)
Effectors as Tools in Disease Resistance Breeding Against Biotrophic, Hemibiotrophic, and Necrotrophic Plant Pathogens
Vivianne G. A. A. Vleeshouwers et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2014)
LocTree3 prediction of localization
Tatyana Goldberg et al.
NUCLEIC ACIDS RESEARCH (2014)
Virulence and Molecular Analyses Support Asexual Reproduction of Puccinia striiformis f. sp tritici in the US Pacific Northwest
P. Cheng et al.
PHYTOPATHOLOGY (2014)
Virulence Characterization of Puccinia striiformis f. sp tritici Using a New Set of Yr Single-Gene Line Differentials in the United States in 2010
Anmin Wan et al.
PLANT DISEASE (2014)
Candida albicans SOD5 represents the prototype of an unprecedented class of Cu-only superoxide dismutases required for pathogen defense
Julie E. Gleason et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
The Ins and Outs of Rust Haustoria
Diana P. Garnica et al.
PLOS PATHOGENS (2014)
Effector proteins of rust fungi
Benjamin Petre et al.
Frontiers in Plant Science (2014)
The genome sequence and effector complement of the flax rust pathogen Melampsora lini
Adnane Nemri et al.
FRONTIERS IN PLANT SCIENCE (2014)
Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors
Dario Cantu et al.
BMC GENOMICS (2013)
Strategies for Wheat Stripe Rust Pathogenicity Identified by Transcriptome Sequencing
Diana P. Garnica et al.
PLOS ONE (2013)
High genome heterozygosity and endemic genetic recombination in the wheat stripe rust fungus
Wenming Zheng et al.
NATURE COMMUNICATIONS (2013)
Virulence Dynamics and Regional Structuring of Puccinia striiformis f. sp tritici in France Between 1984 and 2009
Claude de Vallavieille-Pope et al.
PLANT DISEASE (2012)
Virulence, Frequency, and Distribution of Races of Puccinia striiformis f. sp tritici P. striiformis f. sp hordei Identified in the United States in 2008 and 2009
Anmin Wan et al.
PLANT DISEASE (2012)
Using Hierarchical Clustering of Secreted Protein Families to Classify and Rank Candidate Effectors of Rust Fungi
Diane G. O. Saunders et al.
PLOS ONE (2012)
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
Fredrik Ronquist et al.
SYSTEMATIC BIOLOGY (2012)
Indifferent, Affectionate, or Deceitful: Lifestyles and Secretomes of Fungi
Rohan G. T. Lowe et al.
PLOS PATHOGENS (2012)
Correcting errors in short reads by multiple alignments
Leena Salmela et al.
BIOINFORMATICS (2011)
ProtTest 3: fast selection of best-fit models of protein evolution
Diego Darriba et al.
BIOINFORMATICS (2011)
The variant call format and VCFtools
Petr Danecek et al.
BIOINFORMATICS (2011)
A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
Heng Li
BIOINFORMATICS (2011)
FIMO: scanning for occurrences of a given motif
Charles E. Grant et al.
BIOINFORMATICS (2011)
Proteinortho: Detection of (Co-)orthologs in large-scale analysis
Marcus Lechner et al.
BMC BIOINFORMATICS (2011)
Prospects for functional analysis of effectors from cereal rust fungi
Chuntao Yin et al.
EUPHYTICA (2011)
Global status of stripe rust: a review of historical and current threats
Colin R. Wellings
EUPHYTICA (2011)
Gene expression profiling of Puccinia striiformis f. sp tritici during development reveals a highly dynamic transcriptome
Xueling Huang et al.
JOURNAL OF GENETICS AND GENOMICS (2011)
Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
Fabian Sievers et al.
MOLECULAR SYSTEMS BIOLOGY (2011)
A framework for variation discovery and genotyping using next-generation DNA sequencing data
Mark A. DePristo et al.
NATURE GENETICS (2011)
The Pepper E3 Ubiquitin Ligase RING1 Gene, CaRING1, Is Required for Cell Death and the Salicylic Acid-Dependent Defense Response
Dong Hyuk Lee et al.
PLANT PHYSIOLOGY (2011)
Next Generation Sequencing Provides Rapid Access to the Genome of Puccinia striiformis f. sp tritici, the Causal Agent of Wheat Stripe Rust
Dario Cantu et al.
PLOS ONE (2011)
Obligate biotrophy features unraveled by the genomic analysis of rust fungi
Sebastien Duplessis et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Fast and accurate long-read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2010)
Powdery mildew fungal effector candidates share N-terminal Y/F/WxC-motif
Dale Godfrey et al.
BMC GENOMICS (2010)
Virulence races of Puccinia striiformis f. sp tritici in 2006 and 2007 and development of wheat stripe rust and distributions, dynamics, and evolutionary relationships of races from 2000 to 2007 in the United States
Xianming Chen et al.
CANADIAN JOURNAL OF PLANT PATHOLOGY (2010)
FASconCAT: Convenient handling of data matrices
Patrick Kueck et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2010)
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Cole Trapnell et al.
NATURE BIOTECHNOLOGY (2010)
Sho1 and Msb2-Related Proteins Regulate Appressorium Development in the Smut Fungus Ustilago maydis
Daniel Lanver et al.
PLANT CELL (2010)
NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction
Alex N. Nguyen Ba et al.
BMC BIOINFORMATICS (2009)
Generation and analysis of expression sequence tags from haustoria of the wheat stripe rust fungus Puccinia striiformis f. sp Tritici
Chuntao Yin et al.
BMC GENOMICS (2009)
Role of the Botrytis cinerea FKBP12 ortholog in pathogenic development and in sulfur regulation
Heber Gamboa Melendez et al.
FUNGAL GENETICS AND BIOLOGY (2009)
A Novel Pathogenicity Gene Is Required in the Rice Blast Fungus to Suppress the Basal Defenses of the Host
Myoung-Hwan Chi et al.
PLOS PATHOGENS (2009)
Rapid global spread of two aggressive strains of a wheat rust fungus
Mogens S. Hovmoller et al.
MOLECULAR ECOLOGY (2008)
NucPred - Predicting nuclear localization of proteins
Markus Brameier et al.
BIOINFORMATICS (2007)
Haustorially expressed secreted proteins from flax rust are highly enriched for avirulence elicitors
AM Catanzariti et al.
PLANT CELL (2006)
Blast2GO:: a universal tool for annotation, visualization and analysis in functional genomics research
A Conesa et al.
BIOINFORMATICS (2005)
Superoxide dismutases in Candida albicans:: Transcriptional regulation and functional characterization of the hyphal-induced SOD5 gene
M Martchenko et al.
MOLECULAR BIOLOGY OF THE CELL (2004)
A putative polyketide synthase peptide synthetase from Magnaporthe grisea signals pathogen attack to resistant rice
HU Böhnert et al.
PLANT CELL (2004)
An eight-cysteine-containing CFEM domain unique to a group of fungal membrane proteins
RD Kulkarni et al.
TRENDS IN BIOCHEMICAL SCIENCES (2003)
Epidemiology - Aerial dispersal of pathogens on the global and continental scales and its impact on plant disease
JKM Brown et al.
SCIENCE (2002)
Breakdown of the Yr17 resistance to yellow rust of wheat in northern Europe
RA Bayles et al.
AGRONOMIE (2000)