Related references
Note: Only part of the references are listed.It is elemental: soil nutrient stoichiometry drives bacterial diversity
Manuel Delgado-Baquerizo et al.
ENVIRONMENTAL MICROBIOLOGY (2017)
Marine Phages As Tracers: Effects of Size, Morphology, and Physico-Chemical Surface Properties on Transport in a Porous Medium
Nawras Ghanem et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2016)
Optimization of viral resuspension methods for carbon-rich soils along a permafrost thaw gradient
Gareth Trubl et al.
PEERJ (2016)
How Deep Can Surface Signals Be Traced in the Critical Zone? Merging Biodiversity with Biogeochemistry Research in a Central German Muschelkalk Landscape
Kirsten Kuesel et al.
FRONTIERS IN EARTH SCIENCE (2016)
Distinct Circular Single-Stranded DNA Viruses Exist in Different Soil Types
Brian Reavy et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)
Soil bacterial communities are shaped by temporal and environmental filtering: evidence from a long-term chronosequence
Zachary Freedman et al.
ENVIRONMENTAL MICROBIOLOGY (2015)
Patterns and ecological drivers of ocean viral communities
Jennifer R. Brum et al.
SCIENCE (2015)
Metagenomic analysis of the viral community in Namib Desert hypoliths
Evelien M. Adriaenssens et al.
ENVIRONMENTAL MICROBIOLOGY (2015)
Dynamics of autochthonous soil viral communities parallels dynamics of host communities under nutrient stimulation
Sharath Srinivasiah et al.
FEMS MICROBIOLOGY ECOLOGY (2015)
Using Signature Genes as Tools To Assess Environmental Viral Ecology and Diversity
Evelien M. Adriaenssens et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)
Influence of buffalo manure, compost, vermicompost and biochar amendments on bacterial and viral communities in soil and adjacent aquatic systems
Thuy Thu Doan et al.
APPLIED SOIL ECOLOGY (2014)
Seasonal variations in PCR-DGGE fingerprinted viruses infecting phytoplankton in large and deep peri-alpine lakes
X. Zhong et al.
ECOLOGICAL RESEARCH (2014)
Effect of different long-term fertilization regimes on the viral community in an agricultural soil of Southern China
Lin Chen et al.
EUROPEAN JOURNAL OF SOIL BIOLOGY (2014)
Community fingerprinting in a sequencing world
Josie van Dorst et al.
FEMS MICROBIOLOGY ECOLOGY (2014)
Modeling ecological drivers in marine viral communities using comparative metagenomics and network analyses
Bonnie L. Hurwitz et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
A tiered assessment approach based on standardized methods to estimate the impact of nicosulfuron on the abundance and function of the soil microbial community
D. G. Karpouzas et al.
SOIL BIOLOGY & BIOCHEMISTRY (2014)
Stormwater runoff drives viral changes in inland freshwaters community composition
Kurt E. Williamson et al.
FRONTIERS IN MICROBIOLOGY (2014)
Direct Assessment of Viral Diversity in Soils by Random PCR Amplification of Polymorphic DNA
Sharath Srinivasiah et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Estimates of viral abundance in soils are strongly influenced by extraction and enumeration methods
Kurt E. Williamson et al.
BIOLOGY AND FERTILITY OF SOILS (2013)
Alkane-degrading bacteria at the soil-litter interface: comparing isolates with T-RFLP-based community profiles
Julia Giebler et al.
FEMS MICROBIOLOGY ECOLOGY (2013)
Short-term observations of marine bacterial and viral communities: patterns, connections and resilience
David M. Needham et al.
ISME JOURNAL (2013)
Soil moisture effect on bacterial and fungal community in Beilu River (Tibetan Plateau) permafrost soils with different vegetation types
X. F. Zhang et al.
JOURNAL OF APPLIED MICROBIOLOGY (2013)
To kill or not to kill: The balance between lytic and lysogenic viral infection is driven by trophic status
Jerome P. Payet et al.
LIMNOLOGY AND OCEANOGRAPHY (2013)
The flows of nitrogen, bacteria and viruses from the soil to water compartments are influenced by earthworm activity and organic fertilization (compost vs. vermicompost)
Joel Amosse et al.
SOIL BIOLOGY & BIOCHEMISTRY (2013)
Temporal Dynamics and Decay of Putatively Allochthonous and Autochthonous Viral Genotypes in Contrasting Freshwater Lakes
Ian Hewson et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Standardisation of methods in soil microbiology: progress and challenges
Laurent Philippot et al.
FEMS MICROBIOLOGY ECOLOGY (2012)
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients
Noah Fierer et al.
ISME JOURNAL (2012)
Ocean time-series reveals recurring seasonal patterns of virioplankton dynamics in the northwestern Sargasso Sea
Rachel J. Parsons et al.
ISME JOURNAL (2012)
Plant litter and soil type drive abundance, activity and community structure of alkB harbouring microbes in different soil compartments
Stephan Schulz et al.
ISME JOURNAL (2012)
Bias in Bacteriophage Morphological Classification by Transmission Electron Microscopy Due to Breakage or Loss of Tail Structures
Kurt E. Williamson et al.
MICROSCOPY RESEARCH AND TECHNIQUE (2012)
Fluorescence in situ hybridization (CARD-FISH) of microorganisms in hydrocarbon contaminated aquifer sediment samples
Karolin Tischer et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2012)
Is the genetic landscape of the deep subsurface biosphere affected by viruses?
Rika E. Anderson et al.
FRONTIERS IN MICROBIOLOGY (2011)
Bacteriophage predation regulates microbial abundance and diversity in a full-scale bioreactor treating industrial wastewater
Orr H. Shapiro et al.
ISME JOURNAL (2010)
Viruses in soils: morphological diversity and abundance in the rhizosphere
M. M. Swanson et al.
ANNALS OF APPLIED BIOLOGY (2009)
Seasonal Dynamics and Metagenomic Characterization of Estuarine Viriobenthos Assemblages by Randomly Amplified Polymorphic DNA PCR
Rebekah R. Helton et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Laboratory procedures to generate viral metagenomes
Rebecca V. Thurber et al.
NATURE PROTOCOLS (2009)
Randomly amplified polymorphic DNA PCR as a tool for assessment of marine viral richness
Danielle M. Winget et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Amplification of uncultured single-stranded DNA viruses from rice paddy soil
Kyoung-Ho Kim et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Lysogenic virus-host interactions predominate at deep-sea diffuse-flow hydrothermal vents
Shannon J. Williamson et al.
ISME JOURNAL (2008)
Major viral impact on the functioning of benthic deep-sea ecosystems
Roberto Danovaro et al.
NATURE (2008)
Biodiversity and biogeography of phages in modern stromatolites and thrombolites
Christelle Desnues et al.
NATURE (2008)
The influence of soil properties on the structure of bacterial and fungal communities across land-use types
Christian L. Lauber et al.
SOIL BIOLOGY & BIOCHEMISTRY (2008)
Ecology of viruses in soils: Past, present and future perspectives
Makoto Kimura et al.
SOIL SCIENCE AND PLANT NUTRITION (2008)
Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil
Noah Fierer et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
Incidence of lysogeny within temperate and extreme soil environments
Kurt E. Williamson et al.
ENVIRONMENTAL MICROBIOLOGY (2007)
Viral dynamics and patterns of lysogeny in saline Antarctic lakes
Johanna Laybourn-Parry et al.
POLAR BIOLOGY (2007)
Seasonal variations in virus-host populations in Norwegian coastal waters:: Focusing on the cyanophage community infecting marine Synechococcus spp.
Ruth-Anne Sandaa et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Statistical methods for characterizing diversity of microbial communities by analysis of terminal restriction fragment length polymorphisms of 16S rRNA genes
Z Abdo et al.
ENVIRONMENTAL MICROBIOLOGY (2006)
Abundance and diversity of viruses in six Delaware soils
KE Williamson et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Geographic and environmental sources of variation in lake bacterial community composition
AC Yannarell et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Impact of lime, nitrogen and plant species on bacterial community structure in grassland microcosms
N Kennedy et al.
ENVIRONMENTAL MICROBIOLOGY (2004)
Virus succession observed during an Emiliania huxleyi bloom
DC Schroeder et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2003)
Influence of depth and sampling time on bacterial community structure in an upland grassland soil
RI Griffiths et al.
FEMS MICROBIOLOGY ECOLOGY (2003)
Sampling natural viral communities from soil for culture-independent analyses
KE Williamson et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2003)
Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir
K Simek et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2001)
Diversity and seasonal fluctuations of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods
E Smit et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2001)
Persistence and distribution of wild-type and recombinant nucleopolyhedroviruses in soil
JR Fuxa et al.
MICROBIAL ECOLOGY (2001)
Population dynamics and diversity of phytoplankton, bacteria and viruses in a seawater enclosure
A Larsen et al.
MARINE ECOLOGY PROGRESS SERIES (2001)
Virus removal and transport in saturated and unsaturated sand columns
Y Jin et al.
JOURNAL OF CONTAMINANT HYDROLOGY (2000)
An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics
AM Osborn et al.
ENVIRONMENTAL MICROBIOLOGY (2000)