Related references
Note: Only part of the references are listed.Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species
Devin Coleman-Derr et al.
NEW PHYTOLOGIST (2016)
Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys
William Walters et al.
MSYSTEMS (2016)
Eukaryotic plankton diversity in the sunlit ocean
Colomban de Vargas et al.
SCIENCE (2015)
The Earth Microbiome project: successes and aspirations
Jack A. Gilbert et al.
BMC BIOLOGY (2014)
RNA-Seq Transcriptome Profiling Identifies CRISPLD2 as a Glucocorticoid Responsive Gene that Modulates Cytokine Function in Airway Smooth Muscle Cells
Blanca E. Himes et al.
PLOS ONE (2014)
From barcoding single individuals to metabarcoding biological communities: towards an integrative approach to the study of global biodiversity
Melania E. Cristescu
TRENDS IN ECOLOGY & EVOLUTION (2014)
Towards a unified paradigm for sequence-based identification of fungi
Urmas Koljalg et al.
MOLECULAR ECOLOGY (2013)
The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
Laure Guillou et al.
NUCLEIC ACIDS RESEARCH (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
Paul J. McMurdie et al.
PLOS ONE (2013)
Spider: An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding
Samuel D. J. Brown et al.
MOLECULAR ECOLOGY RESOURCES (2012)
Structure, function and diversity of the healthy human microbiome
Curtis Huttenhower et al.
NATURE (2012)
Metagenomic microbial community profiling using unique clade-specific marker genes
Nicola Segata et al.
NATURE METHODS (2012)
GenBank
Dennis A. Benson et al.
NUCLEIC ACIDS RESEARCH (2012)
Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring
Douglas W. Yu et al.
METHODS IN ECOLOGY AND EVOLUTION (2012)
An In silico approach for the evaluation of DNA barcodes
Gentile Francesco Ficetola et al.
BMC GENOMICS (2010)
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
T. Z. DeSantis et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
APE: Analyses of Phylogenetics and Evolution in R language
E Paradis et al.
BIOINFORMATICS (2004)