Journal
BIOINFORMATICS
Volume 33, Issue 16, Pages 2583-2585Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btx198
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- German Federal Ministry of Education and Research (BMBF) [FKZ 0315954A]
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Motivation: Microsatellites are a widely-used marker system in plant genetics and forensics. The development of reliable microsatellite markers from resequencing data is challenging. Results: We extended MISA, a computational tool assisting the development of microsatellite markers, and reimplemented it as a web-based application. We improved compound microsatellite detection and added the possibility to display and export MISA results in GFF3 format for downstream analysis. Availability and Implementation: MISA-web can be accessed under http://misaweb.ipk-gatersleben.de/. The website provides tutorials, usage note as well as download links to the source code.
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