Journal
BIOINFORMATICS
Volume 33, Issue 24, Pages 4007-4009Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btx499
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Funding
- Wellcome Trust [097821/Z/11/Z, 105614/Z/14/Z]
- BBSRC WestBio DTP [BB/J013854/1]
- Medical Research Council [MR/N005813/1] Funding Source: researchfish
- MRC [MR/N005813/1] Funding Source: UKRI
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The Polyomics integrated Metabolomics Pipeline (PiMP) fulfils an unmet need in metabolomics data analysis. PiMP offers automated and user-friendly analysis from mass spectrometry data acquisition to biological interpretation. Our key innovations are the Summary Page, which provides a simple overview of the experiment in the format of a scientific paper, containing the key findings of the experiment along with associated metadata; and the Metabolite Page, which provides a list of each metabolite accompanied by 'evidence cards', which provide a variety of criteria behind metabolite annotation including peak shapes, intensities in different sample groups and database information.
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