4.5 Review

DEFINING THE ROLE OF OMICS IN ASSESSING ECOSYSTEM HEALTH: PERSPECTIVES FROM THE CANADIAN ENVIRONMENTAL MONITORING PROGRAM

Related references

Note: Only part of the references are listed.
Article Environmental Sciences

Development of an Adaptive Monitoring Framework for Long-Term Programs: An Example Using Indicators of Fish Health

Tim J. Arciszewski et al.

INTEGRATED ENVIRONMENTAL ASSESSMENT AND MANAGEMENT (2015)

Article Marine & Freshwater Biology

Sensitivity of the vitellogenin assay to diagnose exposure of fathead minnows to 17α-ethynylestradiol

Robert W. Flick et al.

AQUATIC TOXICOLOGY (2014)

Article Environmental Sciences

Pyruvate carboxylase as a sensitive protein biomarker for exogenous steroid chemicals

Xuefang Liang et al.

ENVIRONMENTAL POLLUTION (2014)

Article Engineering, Environmental

Spatial Variation in Transcript and Protein Abundance of Atlantic Salmon during Feeding Migration in the Baltic Sea

Mirella Kanerva et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2014)

Review Engineering, Environmental

Next-Generation Proteomics: Toward Customized Biomarkers for Environmental Biomonitoring

Judith Trapp et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2014)

Article Endocrinology & Metabolism

Cyp19a1 (Aromatase) Expression in the Xenopus Brain at Different Developmental Stages

P. Coumailleau et al.

JOURNAL OF NEUROENDOCRINOLOGY (2014)

Review Biochemical Research Methods

Non-model organisms, a species endangered by proteogenomics

Jean Armengaud et al.

JOURNAL OF PROTEOMICS (2014)

Review Biotechnology & Applied Microbiology

RNA-Seq Technology and Its Application in Fish Transcriptomics

Xi Qian et al.

OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY (2014)

Article Environmental Sciences

Correlation of gene expression and contaminant concentrations in wild largescale suckers: A field-based study

Helena E. Christiansen et al.

SCIENCE OF THE TOTAL ENVIRONMENT (2014)

Article Environmental Sciences

Transcriptomic profiling permits the identification of pollutant sources and effects in ambient water samples

Matthias Hasenbein et al.

SCIENCE OF THE TOTAL ENVIRONMENT (2014)

Article Biochemistry & Molecular Biology

Transcriptional responses of male fathead minnows exposed to oil sands process-affected water

Steve B. Wiseman et al.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY (2013)

Article Biochemistry & Molecular Biology

Concentration-response relationships and temporal patterns in hepatic gene expression of Chinook salmon (Oncorhynchus tshawytscha) exposed to sewage

H. L. Osachoff et al.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS (2013)

Article Biochemistry & Molecular Biology

Assessing gene network stability and individual variability in the fathead minnow (Pimephales promelas) transcriptome

Christopher J. Martyniuk et al.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS (2013)

Article Engineering, Environmental

Gene Expression of Fathead Minnows (Pimephales promelas) Exposed to Two Types of Treated Municipal Wastewater Effluents

Doris E. Vidal-Dorsch et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2013)

Article Multidisciplinary Sciences

Gene Expression Networks Underlying Ovarian Development in Wild Largemouth Bass (Micropterus salmoides)

Christopher J. Martyniuk et al.

PLOS ONE (2013)

Article Multidisciplinary Sciences

Circadian Clock Regulation of the Cell Cycle in the Zebrafish Intestine

Elodie Peyric et al.

PLOS ONE (2013)

Article Biotechnology & Applied Microbiology

RNA-Seq reveals complex genetic response to deepwater horizon oil release in Fundulus grandis

Tzintzuni I. Garcia et al.

BMC GENOMICS (2012)

Article Environmental Sciences

Proteomic analysis of Sydney Rock oysters (Saccostrea glomerata) exposed to metal contamination in the field

Emma L. Thompson et al.

ENVIRONMENTAL POLLUTION (2012)

Article Engineering, Environmental

Using Gene Expression to Assess the Status of Fish from Anthropogenically Influenced Estuarine Wetlands

Doris E. Vidal-Dorsch et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2012)

Article Engineering, Environmental

Taking Microarrays to the Field: Differential Hepatic Gene Expression of Caged Fathead Minnows from Nebraska Watersheds

Marlo K. Sellin Jeffries et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2012)

Review Endocrinology & Metabolism

Quantitative proteomics in teleost fish: Insights and challenges for neuroendocrine and neurotoxicology research

Christopher J. Martyniuk et al.

GENERAL AND COMPARATIVE ENDOCRINOLOGY (2012)

Article Biochemistry & Molecular Biology

Transcriptomic profiles of Japanese medaka (Oryzias latipes) in response to alkalinity stress

Z. L. Yao et al.

GENETICS AND MOLECULAR RESEARCH (2012)

Review Biochemical Research Methods

Proteomic research in bivalves Towards the identification of molecular markers of aquatic pollution

Alexandre Campos et al.

JOURNAL OF PROTEOMICS (2012)

Article Multidisciplinary Sciences

Genomic and physiological footprint of the Deepwater Horizon oil spill on resident marsh fishes

Andrew Whitehead et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Genetics & Heredity

Applications for next-generation sequencing in fish ecotoxicogenomics

Alvine C. Mehinto et al.

Frontiers in Genetics (2012)

Article Marine & Freshwater Biology

Behavioral and genomic impacts of a wastewater effluent on the fathead minnow

Natalia Garcia-Reyero et al.

AQUATIC TOXICOLOGY (2011)

Article Behavioral Sciences

Brain Transcriptomic Response of Threespine Sticklebacks to Cues of a Predator

Yibayiri O. Sanogo et al.

BRAIN BEHAVIOR AND EVOLUTION (2011)

Article Biochemistry & Molecular Biology

Influence of gender, feeding regimen, and exposure duration on gene expression associated with xenobiotic metabolism in fathead minnows (Pimephales promelas)

Jordan Crago et al.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY (2011)

Article Engineering, Environmental

Reproducible 1H NMR-Based Metabolomic Responses in Fish Exposed to Different Sewage Effluents in Two Separate Studies

Linda M. Samuelsson et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2011)

Article Engineering, Environmental

Hepatic Transcriptomics and Protein Expression in Rainbow Trout Exposed to Municipal Wastewater Effluent

Jennifer S. Ings et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2011)

Article Environmental Sciences

RELATIONSHIPS BETWEEN THE TRANSCRIPTOME AND PHYSIOLOGICAL INDICATORS OF REPRODUCTION IN FEMALE RAINBOW TROUT OVER AN ANNUAL CYCLE

Sharon E. Hook et al.

ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY (2011)

Article Environmental Sciences

SYSTEMS BIOLOGY: LEADING THE REVOLUTION IN ECOTOXICOLOGY

Natalia Garcia-Reyero et al.

ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY (2011)

Article Environmental Sciences

REVERSE ENGINEERING ADVERSE OUTCOME PATHWAYS

Edward J. Perkins et al.

ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY (2011)

Article Marine & Freshwater Biology

Influence of ovarian stage on transcript profiles in fathead minnow (Pimephales promelas) ovary tissue

Daniel L. Villeneuve et al.

AQUATIC TOXICOLOGY (2010)

Article Environmental Sciences

Metabolic responses produced by crude versus dispersed oil in Chinook salmon pre-smolts via NMR-based metabolomics

April R. Van Scoy et al.

ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY (2010)

Article Engineering, Environmental

Impacts of an Anti-Androgen and an Androgen/Anti-Androgen Mixture on the Metabolite Profile of Male Fathead Minnow Urine

Timothy W. Collette et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2010)

Article Engineering, Environmental

Disruption of the Steroid Metabolome in Fish Caused by Exposure to the Environmental Estrogen 17α-Ethinylestradiol

Anel M. Flores-Valverde et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2010)

Article Environmental Sciences

EFFECTS OF PULP AND PAPER MILL EFFLUENT ON FISH: A TEMPORAL ASSESSMENT OF FISH HEALTH ACROSS SAMPLING CYCLES

Timothy J. Barrett et al.

ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY (2010)

Article Environmental Sciences

ADVERSE OUTCOME PATHWAYS: A CONCEPTUAL FRAMEWORK TO SUPPORT ECOTOXICOLOGY RESEARCH AND RISK ASSESSMENT

Gerald T. Ankley et al.

ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY (2010)

Review Endocrinology & Metabolism

Spermatogenesis in fish

Ruediger W. Schulz et al.

GENERAL AND COMPARATIVE ENDOCRINOLOGY (2010)

Article Biodiversity Conservation

Causal Characteristics for Ecoepidemiology

Susan M. Cormier et al.

HUMAN AND ECOLOGICAL RISK ASSESSMENT (2010)

Article Biochemistry & Molecular Biology

Conservation genomics of Atlantic salmon: variation in gene expression between and within regions of the Bay of Fundy

Wendy Vandersteen Tymchuk et al.

MOLECULAR ECOLOGY (2010)

Article Psychology, Biological

Physiological and health consequences of social status in zebrafish (Danio rerio)

Amy L. Filby et al.

PHYSIOLOGY & BEHAVIOR (2010)

Review Environmental Sciences

A REVIEW OF POTENTIAL METHODS OF DETERMINING CRITICAL EFFECT SIZE FOR DESIGNING ENVIRONMENTAL MONITORING PROGRAMS

Kelly R. Munkittrick et al.

ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY (2009)

Article Engineering, Environmental

Variation, correlation, and toxicity of phenolic endocrine-disrupting compounds in surface water

Ting-Chien Chen et al.

JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH PART A-TOXIC/HAZARDOUS SUBSTANCES & ENVIRONMENTAL ENGINEERING (2009)

Article Marine & Freshwater Biology

Changes in gene expression due to chronic exposure to environmental pollutants

Marjorie F. Oleksiak

AQUATIC TOXICOLOGY (2008)

Article Biochemistry & Molecular Biology

Sexually dimorphic gene expression in the brains of mature zebrafish

Eduarda M. Santos et al.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY (2008)

Article Environmental Sciences

Gene expression profiles of fathead minnows exposed to surface waters above and below a sewage treatment plant in Minnesota

Natalia Garcia-Reyero et al.

MARINE ENVIRONMENTAL RESEARCH (2008)

Review Fisheries

Fish Gonadogenesis. Part II: Molecular Biology and Genomics of Sex Differentiation

Francesc Piferrer et al.

REVIEWS IN FISHERIES SCIENCE (2008)

Review Biotechnology & Applied Microbiology

Ecotoxicological risk assessment using DNA chips and cellular reporters

Johan Robbens et al.

TRENDS IN BIOTECHNOLOGY (2007)

Article Biotechnology & Applied Microbiology

Effect of starvation on global gene expression and proteolysis in rainbow trout (Oncorhynchus mykiss)

Mohamed Salem et al.

BMC GENOMICS (2007)

Article Biochemistry & Molecular Biology

Gene expression pattern in the liver during recovery from an acute stressor in rainbow trout

Steve Wiseman et al.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS (2007)

Article Marine & Freshwater Biology

Using NMR metabolomics to identify responses of an environmental estrogen in blood plasma of fish

Linda M. Samuelsson et al.

AQUATIC TOXICOLOGY (2006)

Article Engineering, Environmental

Plasma proteome analysis reveals the geographical origin and liver tumor status of dab (Limanda limanda) from UK marine waters

Douglas G. Ward et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2006)

Article Marine & Freshwater Biology

Gene expression patterns in rainbow trout, Oncorhynchus mykiss, exposed to a suite of model toxicants

Sharon E. Hook et al.

AQUATIC TOXICOLOGY (2006)

Review Toxicology

Toxicogenomics in risk assessment: Applications and needs

DR Boverhof et al.

TOXICOLOGICAL SCIENCES (2006)

Article Biochemistry & Molecular Biology

Food-deprivation induces HSP70 and HSP90 protein expression in larval gilthead sea bream and rainbow trout

JB Cara et al.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY (2005)

Article Endocrinology & Metabolism

Transcriptional analysis of testis maturation using trout cDNA macroarrays

D Mazurais et al.

GENERAL AND COMPARATIVE ENDOCRINOLOGY (2005)

Article Biotechnology & Applied Microbiology

Gene expression in the brain and kidney of rainbow trout in response to handling stress -: art. no. 3

A Krasnov et al.

BMC GENOMICS (2005)

Article Biotechnology & Applied Microbiology

Variation in tissue-specific gene expression among natural populations

A Whitehead et al.

GENOME BIOLOGY (2005)

Article Immunology

Expression of immune response genes in rainbow trout skin induced by Gyrodactylus derjavini infections

T Lindenstrom et al.

VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY (2004)

Article Biochemistry & Molecular Biology

The effects of temperature reduction on gene expression and oxidative stress in skeletal muscle from adult zebrafish

RL Malek et al.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY (2004)

Article Multidisciplinary Sciences

Coping with cold: An integrative, multitissue analysis of the transcriptome of a poikilothermic vertebrate

AY Gracey et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Article Biodiversity Conservation

Establishing causality between environmental stressors and effects on aquatic ecosystems

SM Adams

HUMAN AND ECOLOGICAL RISK ASSESSMENT (2003)

Review Biochemistry & Molecular Biology

Application of genomics and proteomics for study of the integrated response to zinc exposure in a non-model fish species, the rainbow trout

C Hogstrand et al.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY (2002)

Article Environmental Sciences

An interlaboratory study on the use of steroid hormones in examining endocrine disruption

ME McMaster et al.

ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY (2001)