4.8 Article

Diverse evolutionary patterns of pneumococcal antigens identified by pangenome-wide immunological screening

Related references

Note: Only part of the references are listed.
Article Genetics & Heredity

Selective and Genetic Constraints on Pneumococcal Serotype Switching

Nicholas J. Croucher et al.

PLOS GENETICS (2015)

Article Multidisciplinary Sciences

Population genomic datasets describing the post-vaccine evolutionary epidemiology of Streptococcus pneumoniae

Nicholas J. Croucher et al.

SCIENTIFIC DATA (2015)

Article Genetics & Heredity

FAST: FAST Analysis of Sequences Toolbox

Travis J. Lawrence et al.

FRONTIERS IN GENETICS (2015)

Article Biochemistry & Molecular Biology

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

Nicholas J. Croucher et al.

NUCLEIC ACIDS RESEARCH (2015)

Article Evolutionary Biology

Evidence for Soft Selective Sweeps in the Evolution of Pneumococcal Multidrug Resistance and Vaccine Escape

Nicholas J. Croucher et al.

GENOME BIOLOGY AND EVOLUTION (2014)

Article Multidisciplinary Sciences

Diversification of bacterial genome content through distinct mechanisms over different timescales

Nicholas J. Croucher et al.

NATURE COMMUNICATIONS (2014)

Article Genetics & Heredity

Population genomics of post-vaccine changes in pneumococcal epidemiology

Nicholas J. Croucher et al.

NATURE GENETICS (2013)

Review Microbiology

Emerging themes in SecA2-mediated protein export

Meghan E. Feltcher et al.

NATURE REVIEWS MICROBIOLOGY (2012)

Review Immunology

Next generation pneumococcal vaccines

Kristin L. Moffitt et al.

CURRENT OPINION IN IMMUNOLOGY (2011)

Article Multidisciplinary Sciences

Rapid Pneumococcal Evolution in Response to Clinical Interventions

Nicholas J. Croucher et al.

SCIENCE (2011)

Article Biology

Long-term evolution of antigen repertoires among carried meningococci

Caroline O. Buckee et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2010)

Article Medicine, Research & Experimental

Cellular effectors mediating Th17-dependent clearance of pneumococcal colonization in mice

Zhe Zhang et al.

JOURNAL OF CLINICAL INVESTIGATION (2009)

Article Immunology

Streptococcus pneumoniae contains 3 rlrA pilus variants that are clonally related

Monica Moschioni et al.

JOURNAL OF INFECTIOUS DISEASES (2008)

Article Biochemistry & Molecular Biology

PAML 4: Phylogenetic analysis by maximum likelihood

Ziheng Yang

MOLECULAR BIOLOGY AND EVOLUTION (2007)

Article Genetics & Heredity

An exact nonparametric method for inferring mosaic structure in sequence triplets

Maciej F. Boni et al.

GENETICS (2007)

Article Multidisciplinary Sciences

A pneumococcal pilus influences virulence and host inflammatory responses

MA Barocchi et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Review Biochemistry & Molecular Biology

Mucosal immunity and vaccines

J Holmgren et al.

NATURE MEDICINE (2005)

Article Multidisciplinary Sciences

CD4+ T cells mediate antibody-independent acquired immunity to pneumococcal colonization

R Malley et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biochemical Research Methods

RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees

A Stamatakis et al.

BIOINFORMATICS (2005)

Article Biochemistry & Molecular Biology

MUSCLE: multiple sequence alignment with high accuracy and high throughput

RC Edgar

NUCLEIC ACIDS RESEARCH (2004)

Article Multidisciplinary Sciences

Effects of purifying and adaptive selection on regional variation in human mtDNA

E Ruiz-Pesini et al.

SCIENCE (2004)

Article Biochemistry & Molecular Biology

A broad survey of recombination in animal mitochondria

G Piganeau et al.

MOLECULAR BIOLOGY AND EVOLUTION (2004)

Article Biochemistry & Molecular Biology

The bioperl toolkit:: Perl modules for the life sciences

JE Stajich et al.

GENOME RESEARCH (2002)

Article Biochemistry & Molecular Biology

Accuracy and power of the likelihood ratio test in detecting adaptive molecular evolution

M Anisimova et al.

MOLECULAR BIOLOGY AND EVOLUTION (2001)

Article Multidisciplinary Sciences

Complete genome sequence of a virulent isolate of Streptococcus pneumoniae

H Tettelin et al.

SCIENCE (2001)

Article Biochemistry & Molecular Biology

Hic, a novel surface protein of Streptococcus pneumoniae that interferes with complement function

R Janulczyk et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2000)