4.5 Article

CRISPR-SKIP: programmable gene splicing with single base editors

Journal

GENOME BIOLOGY
Volume 19, Issue -, Pages -

Publisher

BMC
DOI: 10.1186/s13059-018-1482-5

Keywords

Gene editing; Base editing; Exon skipping; Alternative splicing; Synthetic biology; CRISPR-Cas9; RELA; PIK3CA; BRCA2; Gene isoform

Funding

  1. ZJU-Illinois Institute Research Program
  2. American Heart Association Scientist Development Grant [17SDG33650087]
  3. NIH [R01CA163336]
  4. NSF [0822613]
  5. National Science Foundation Graduate Research Fellowship Program [DGE-1746047]

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CRISPR gene editing has revolutionized biomedicine and biotechnology by providing a simple means to engineer genes through targeted double-strand breaks in the genomic DNA of living cells. However, given the stochasticity of cellular DNA repair mechanisms and the potential for off-target mutations, technologies capable of introducing targeted changes with increased precision, such as single-base editors, are preferred. We present a versatile method termed CRISPR-SKIP that utilizes cytidine deaminase single-base editors to program exon skipping by mutating target DNA bases within splice acceptor sites. Given its simplicity and precision, CRISPR-SKIP will be broadly applicable in gene therapy and synthetic biology.

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