4.8 Article

RNase H sequence preferences influence antisense oligonucleotide efficiency

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Managing the sequence-specificity of antisense oligonucleotides in drug discovery

Peter H. Hagedorn et al.

NUCLEIC ACIDS RESEARCH (2017)

Article Biochemistry & Molecular Biology

Viable RNaseH1 knockout mice show RNaseH1 is essential for R loop processing, mitochondrial and liver function

Walt F. Lima et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Biochemistry & Molecular Biology

tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes

Todd M. Lowe et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Multidisciplinary Sciences

Primer retention owing to the absence of RNase H1 is catastrophic for mitochondrial DNA replication

J. Bradley Holmes et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Article Biochemistry & Molecular Biology

Sequence motifs associated with hepatotoxicity of locked nucleic acid-modified antisense oligonucleotides

Andrew D. Burdick et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Medicine, Research & Experimental

A Kinetic Model Explains Why Shorter and Less Affine Enzyme-recruiting Oligonucleotides Can Be More Potent

Lykke Pedersen et al.

MOLECULAR THERAPY-NUCLEIC ACIDS (2014)

Article Multidisciplinary Sciences

Hidden specificity in an apparently nonspecific RNA-binding protein

Ulf-Peter Guenther et al.

NATURE (2013)

Article Biochemistry & Molecular Biology

Complexes of HIV-1 RT, NNRTI and RNA/DNA hybrid reveal a structure compatible with RNA degradation

Mikalai Lapkouski et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)

Article Biochemistry & Molecular Biology

Hepatotoxic Potential of Therapeutic Oligonucleotides Can Be Predicted from Their Sequence and Modification Pattern

Peter H. Hagedorn et al.

NUCLEIC ACID THERAPEUTICS (2013)

Letter Biotechnology & Applied Microbiology

Assessing unintended hybridization-induced biological effects of oligonucleotides

Morten Lindow et al.

NATURE BIOTECHNOLOGY (2012)

Review Genetics & Heredity

Viral evolution in deep time: lentiviruses and mammals

Robert J. Gifford

TRENDS IN GENETICS (2012)

Article Multidisciplinary Sciences

Global quantification of mammalian gene expression control

Bjoern Schwanhaeusser et al.

NATURE (2011)

Article Biochemical Research Methods

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson et al.

BIOINFORMATICS (2010)

Review Biochemistry & Molecular Biology

Formation of the tRNALys packaging complex in HIV-1

Lawrence Kleiman et al.

FEBS LETTERS (2010)

Article Biochemistry & Molecular Biology

Multiple Nucleotide Preferences Determine Cleavage-Site Recognition by the HIV-1 and M-MuLV RNases H

Sharon J. Schultz et al.

JOURNAL OF MOLECULAR BIOLOGY (2010)

Review Biochemistry & Molecular Biology

Ribonuclease H: the enzymes in eukaryotes

Susana M. Cerritelli et al.

FEBS JOURNAL (2009)

Review Biochemistry & Molecular Biology

Ribonuclease H: properties, substrate specificity and roles in retroviral reverse transcription

James J. Champoux et al.

FEBS JOURNAL (2009)

Article Biochemistry & Molecular Biology

Preferred Sequences within a Defined Cleavage Window Specify DNA 3′ End-directed Cleavages by Retroviral RNases H

Sharon J. Schultz et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2009)

Article Biochemistry & Molecular Biology

Structure of human RNase h1 complexed with an RNA/DNA hybrid: Insight into HIV reverse transcription

Marcin Nowotny et al.

MOLECULAR CELL (2007)

Article Biochemistry & Molecular Biology

Sequence, distance, and accessibility are determinants of 5′-end-directed cleavages by retroviral RNases H

SJ Schultz et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2006)

Article Biochemistry & Molecular Biology

Eukaryotic RNases H1 act processively by interactions through the duplex RNA-binding domain

SA Gaidamakov et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemistry & Molecular Biology

Determination of the role of the human RNase H1 in the pharmacology of DNA-like antisense drugs

HJ Wu et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2004)

Review Biochemistry & Molecular Biology

'Binding, bending and bonding': polypurine tract-primed initiation of plus-strand DNA synthesis in human immunodeficiency virus

JW Rausch et al.

INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY (2004)

Review Biochemistry & Molecular Biology

The tRNALys packaging complex in HIV-1

L Kleiman et al.

INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY (2004)

Article Biochemistry & Molecular Biology

Recognition of internal cleavage sites by retroviral RNases H

SJ Schultz et al.

JOURNAL OF MOLECULAR BIOLOGY (2004)

Article Biochemistry & Molecular Biology

Failure to produce mitochondrial DNA results in embryonic lethality in Rnaseh1 null mice

SM Cerritelli et al.

MOLECULAR CELL (2003)

Article Biochemistry & Molecular Biology

The involvement of human ribonucleases H1 and H2 in the variation of response of cells to antisense phosphorothioate oligonucleotides

ALMA ten Asbroek et al.

EUROPEAN JOURNAL OF BIOCHEMISTRY (2002)

Article Biochemistry & Molecular Biology

Initiation of HIV-1 reverse transcription is regulated by a primer activation signal

N Beerens et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2001)

Article Biochemistry & Molecular Biology

Crystal structure of HIV-1 reverse transcriptase in complex with a polypurine tract RNA:DNA

SG Sarafianos et al.

EMBO JOURNAL (2001)

Article Biochemistry & Molecular Biology

Essential regions of the tRNA primer required for HIV-1 infectivity

Q Yu et al.

NUCLEIC ACIDS RESEARCH (2000)

Article Multidisciplinary Sciences

Unique progressive cleavage mechanism of HIV reverse transcriptase RNase H

M Wisniewski et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)

Article Biochemistry & Molecular Biology

Effects of RNA secondary structure on cellular antisense activity

TA Vickers et al.

NUCLEIC ACIDS RESEARCH (2000)