4.8 Article

Moving beyond microbiome-wide associations to causal microbe identification

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Mining the Human Gut Microbiota for Immunomodulatory Organisms

Naama Geva-Zatorsky et al.

Review Multidisciplinary Sciences

Microbiome-wide association studies link dynamic microbial consortia to disease

Jack A. Gilbert et al.

NATURE (2016)

Review Medicine, General & Internal

The Human Intestinal Microbiome in Health and Disease

Susan V. Lynch et al.

NEW ENGLAND JOURNAL OF MEDICINE (2016)

Article Biochemistry & Molecular Biology

Immunoglobulin A Coating Identifies Colitogenic Bacteria in Inflammatory Bowel Disease

Noah W. Palm et al.

Article Microbiology

The Treatment-Naive Microbiome in New-Onset Crohn's Disease

Dirk Gevers et al.

CELL HOST & MICROBE (2014)

Article Multidisciplinary Sciences

PathogenFinder - Distinguishing Friend from Foe Using Bacterial Whole Genome Sequence Data

Salvatore Cosentino et al.

PLOS ONE (2013)

Article Multidisciplinary Sciences

EMPeror: a tool for visualizing high-throughput microbial community data

Yoshiki Vázquez-Baeza et al.

GigaScience (2013)

Article Biochemistry & Molecular Biology

Gut Immune Maturation Depends on Colonization with a Host-Specific Microbiota

Hachung Chung et al.

Article Infectious Diseases

Identification of acquired antimicrobial resistance genes

Ea Zankari et al.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2012)

Article Biotechnology & Applied Microbiology

Metagenomic biomarker discovery and explanation

Nicola Segata et al.

GENOME BIOLOGY (2011)

Article Gastroenterology & Hepatology

Dysbiosis of Fecal Microbiota in Crohn's Disease Patients as Revealed by a Custom Phylogenetic Microarray

Seungha Kang et al.

INFLAMMATORY BOWEL DISEASES (2010)

Letter Biochemical Research Methods

QIIME allows analysis of high-throughput community sequencing data

J. Gregory Caporaso et al.

NATURE METHODS (2010)

Article Biochemistry & Molecular Biology

Induction of Intestinal Th17 Cells by Segmented Filamentous Bacteria

Ivaylo I. Ivanov et al.

Article Multidisciplinary Sciences

A microbial symbiosis factor prevents intestinal inflammatory disease

Sarkis K. Mazmanian et al.

NATURE (2008)

Article Multidisciplinary Sciences

Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases

Daniel N. Frank et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biochemical Research Methods

Chemically induced mouse models of intestinal inflammation

Stefan Wirtz et al.

NATURE PROTOCOLS (2007)

Article Multidisciplinary Sciences

Symbiotic bacteria direct expression of an intestinal bactericidal lectin

Heather L. Cash et al.

SCIENCE (2006)