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Meddling with Fate: The Proteasomal Deubiquitinating Enzymes

Journal

JOURNAL OF MOLECULAR BIOLOGY
Volume 429, Issue 22, Pages 3525-3545

Publisher

ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD
DOI: 10.1016/j.jmb.2017.09.015

Keywords

deubiquitinating enzymes; proteasome; Rpn11; Usp14; Uch37

Funding

  1. National Institutes of Health [R01GM043601]
  2. Dutch Cancer Foundation [BUTT 2015-7517]

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Three deubiquitinating enzymes-Rpnl 1, Usp14, and Uch37-are associated with the proteasome regulatory particle. These enzymes allow proteasomes to remove ubiquitin from substrates before they are translocated into the core particle to be degraded. Although the translocation channel is too narrow for folded proteins, the force of translocation unfolds them mechanically. As translocation proceeds, ubiquitin chains bound to substrate are drawn to the channel's entry port, where they can impede further translocation. Rpn11, situated over the port, can remove these chains without compromising degradation because substrates must be irreversibly committed to degradation before Rpn11 acts. This coupling between deubiquitination and substrate degradation is ensured by the Ins-1 loop of Rpnl 1, which controls ubiquitin access to its catalytic site. In contrast to Rpnl 1, Usp14 and Uch37 can rescue substrates from degradation by promoting substrate dissociation from the proteasome prior to the commitment step. Uch37 is unique in being a component of both the proteasome and a second multisubunit assembly, the IN080 complex. However, only recruitment into the proteasome activates Uch37. Recruitment to the proteasome likewise activates Usp14. However, the influence of Usp14 on the proteasome depends on the substrate, due to its marked preference for proteins that carry multiple ubiquitin chains. Usp14 exerts complex control over the proteasome, suppressing proteasome activity even when inactive in deubiquitination. A major challenge for the field will be to elucidate the specificities of Rpn11, Usp14, and Uch37 in greater depth, employing not only model in vitro substrates but also their endogenous targets. (C) 2017 Elsevier Ltd. All rights reserved.

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