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Enhancing genetic gain in the era of molecular breeding

Journal

JOURNAL OF EXPERIMENTAL BOTANY
Volume 68, Issue 11, Pages 2641-2666

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/jxb/erx135

Keywords

Breeding cycle time; doubled haploids; envirotyping; genetic gain; genetic variation; genotyping; heritability; marker-assisted selection; phenotyping; selection intensity

Categories

Funding

  1. National Key Research and Development Program of China [2016YFD0101803]
  2. National Key Basic Research Program of China [2014 CB138206]
  3. National Natural Science Foundation of China-CGIAR International Collaborative Program [31361140364]
  4. National Natural Science Foundation of China [31271736]
  5. Ministry of Science and Technology of China [KY201402017]
  6. Agricultural Science and Technology Innovation Program (ASTIP) of CAAS
  7. Bill and Melinda Gates Foundation
  8. CGIAR Research Program MAIZE
  9. Science and Technology Partnership Program

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As one of the important concepts in conventional quantitative genetics and breeding, genetic gain can be defined as the amount of increase in performance that is achieved annually through artificial selection. To develop products that meet the increasing demand of mankind, especially for food and feed, in addition to various industrial uses, breeders are challenged to enhance the potential of genetic gain continuously, at ever higher rates, while they close the gaps that remain between the yield potential in breeders' demonstration trials and the actual yield in farmers' fields. Factors affecting genetic gain include genetic variation available in breeding materials, heritability for traits of interest, selection intensity, and the time required to complete a breeding cycle. Genetic gain can be improved through enhancing the potential and closing the gaps, which has been evolving and complemented with modern breeding techniques and platforms, mainly driven by molecular and genomic tools, combined with improved agronomic practice. Several key strategies are reviewed in this article. Favorable genetic variation can be unlocked and created through molecular and genomic approaches including mutation, gene mapping and discovery, and transgene and genome editing. Estimation of heritability can be improved by refining field experiments through well-controlled and precisely assayed environmental factors or envirotyping, particularly for understanding and controlling spatial heterogeneity at the field level. Selection intensity can be significantly heightened through improvements in the scale and precision of genotyping and phenotyping. The breeding cycle time can be shortened by accelerating breeding procedures through integrated breeding approaches such as marker-assisted selection and doubled haploid development. All the strategies can be integrated with other widely used conventional approaches in breeding programs to enhance genetic gain. More transdisciplinary approaches, team breeding, will be required to address the challenge of maintaining a plentiful and safe food supply for future generations. New opportunities for enhancing genetic gain, a high efficiency breeding pipeline, and broad-sense genetic gain are also discussed prospectively.

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