4.4 Article

Specific phosphorothioate substitution within domain 6 of a group II intron ribozyme leads to changes in local structure and metal ion binding

Related references

Note: Only part of the references are listed.
Review Biochemistry & Molecular Biology

Structural Insights into the Mechanism of Group II Intron Splicing

Chen Zhao et al.

TRENDS IN BIOCHEMICAL SCIENCES (2017)

Review Biophysics

Group II Intron Self-Splicing

Anna Marie Pyle

ANNUAL REVIEW OF BIOPHYSICS, VOL 45 (2016)

Review Genetics & Heredity

Evolution of group II introns

Steven Zimmerly et al.

MOBILE DNA (2015)

Article Microbiology

Mobile Bacterial Group II Introns at the Crux of Eukaryotic Evolution

Alan M. Lambowitz et al.

MICROBIOLOGY SPECTRUM (2015)

Article Multidisciplinary Sciences

Crystal structure of a eukaryotic group II intron lariat

Aaron R. Robart et al.

NATURE (2014)

Article Chemistry, Inorganic & Nuclear

Hexaamminecobalt(III) - Probing Metal Ion Binding Sites in Nucleic Acids by NMR Spectroscopy

Magdalena Rowinska-Zyrek et al.

ZEITSCHRIFT FUR ANORGANISCHE UND ALLGEMEINE CHEMIE (2013)

Review Chemistry, Inorganic & Nuclear

Accurate analysis of Mg2+ binding to RNA: From classical methods to a novel iterative calculation procedure

Michele C. Erat et al.

COORDINATION CHEMISTRY REVIEWS (2012)

Review Chemistry, Multidisciplinary

A Stability Concept for Metal Ion Coordination to Single-Stranded Nucleic Acids and Affinities of Individual Sites

Roland K. O. Sigel et al.

ACCOUNTS OF CHEMICAL RESEARCH (2010)

Review Biochemistry & Molecular Biology

The tertiary structure of group II introns: implications for biological function and evolution

Anna Marie Pyle

CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY (2010)

Review Biochemistry & Molecular Biology

Controlling ribozyme activity by metal ions

Joachim Schnabl et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2010)

Article Multidisciplinary Sciences

Single-molecule analysis of Mss116-mediated group II intron folding

Krishanthi S. Karunatilaka et al.

NATURE (2010)

Article Biochemistry & Molecular Biology

Tertiary architecture of the Oceanobacillus iheyensis group II intron

Navtej Toor et al.

Article Chemistry, Multidisciplinary

Ca2+ Induces the Formation of Two Distinct Subpopulations of Group II Intron Molecules

Miriam Steiner et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2009)

Review Biochemical Research Methods

Identification of catalytic metal ion ligands in ribozymes

John K. Frederiksen et al.

METHODS (2009)

Article Biochemistry & Molecular Biology

Divalent metal ions tune the self-splicing reaction of the yeast mitochondrial group II intron Sc.ai5γ

Michele C. Erat et al.

JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY (2008)

Article Multidisciplinary Sciences

Single-molecule studies of group II intron ribozymes

Miriam Steiner et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

Crystal structure of a self-spliced group II intron

Navtej Toor et al.

SCIENCE (2008)

Article Chemistry, Inorganic & Nuclear

From nucleotides to ribozymes - A comparison of their metal ion binding properties

Eva Freisinger et al.

COORDINATION CHEMISTRY REVIEWS (2007)

Article Biochemistry & Molecular Biology

A second divalent metal ion in the group II intron reaction center

Peter M. Gordon et al.

CHEMISTRY & BIOLOGY (2007)

Review Chemistry, Multidisciplinary

Alternative roles for metal ions in enzyme catalysis and the implications for ribozyme chemistry

Roland K. O. Sigel et al.

CHEMICAL REVIEWS (2007)

Article Biochemistry & Molecular Biology

Role of metal ions in the tetraloop-receptor complex as analyzed by NMR

Jared H. Davis et al.

Review Biochemistry & Molecular Biology

RNA splicing: group I intron crystal structures reveal the basis of splice site selection and metal ion catalysis

Mary R. Stahley et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2006)

Article Chemistry, Multidisciplinary

Acid-base and metal-ion binding properties of the RNA dinucleotide uridylyl-(5′→ 3′)-[5′]uridylate (pUpU3-)

B Knobloch et al.

CHEMISTRY-A EUROPEAN JOURNAL (2005)

Article Biochemistry & Molecular Biology

Solution structure of domain 5 of a group II intron ribozyme reveals a new RNA motif

RKO Sigel et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2004)

Review Biochemistry & Molecular Biology

Metal ion binding to catalytic RNA molecules

VJ DeRose

CURRENT OPINION IN STRUCTURAL BIOLOGY (2003)

Article Biochemical Research Methods

The Xplor-NIH NMR molecular structure determination package

CD Schwieters et al.

JOURNAL OF MAGNETIC RESONANCE (2003)

Article Biochemistry & Molecular Biology

Metal ion coordination by the AGC triad in domain 5 contributes to group II intron catalysis

PM Gordon et al.

NATURE STRUCTURAL BIOLOGY (2001)

Article Chemistry, Multidisciplinary

Direct evidence for Watson-Crick base pairs in a dynamic region of RNA structure

B Luy et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2000)

Article Biochemistry & Molecular Biology

Phosphorothioate substitution can substantially alter RNA conformation

JS Smith et al.

BIOCHEMISTRY (2000)

Article Biochemistry & Molecular Biology

Fast folding of a ribozyme by stabilizing core interactions: Evidence for multiple folding pathways in RNA

J Pan et al.

JOURNAL OF MOLECULAR BIOLOGY (2000)

Article Biochemistry & Molecular Biology

Solution structure of cobalt(III)hexammine complexed to the GAAA tetraloop, and metal-ion binding to G•A mismatches

S Rüdisser et al.

JOURNAL OF MOLECULAR BIOLOGY (2000)